| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5616 |
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| Symbol | |
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| ID | 5673943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6827353 |
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| End bp | 6828396 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641244469 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001509873 |
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| Protein GI | 158317365 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0605675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.548217 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTGACC GAATGCTCAG CAATCCCGAT GGTAGCCCCA GCGGCCATCC GGCCACCGGC
CGGCTCGCCG TGACGATGGA CACATCGGCG GGGGTTTCTC GGCCGCCCGG CGTGGCGGCC
CCGCACCGGG CACCCACGAT GCGGCACGCG CCGATCTCGG CGACGTCCGC GGTGGGCCAC
CCGGGCGCCC GTACCCGTCC CGGCGCGGTG GCGGCGGGTC TGCCCGGCCG CGCCCCGGTC
GCGGCCCGCG GGCCGCAGGT GCCGCGGGAT CTGGCGCTCG GCGCGGCGGA GCTGCGCGGC
GTGCTCCGTG TCGTCGAGGA CTGCGAACGA GCGGCGTCGC TGCCGGCGTT CCGCGAGGCG
GCGCTCGACG GGATGGCCCG CCATCTCGGC TACCGCCACT CGGCGTTCTT CCTCGGCTCG
TCCCCGCAGG CGACCTTCCA GGACGCCCGC CCGACTGGTC GCGGTCTCGC GCTGCGCATG
GCCGGGCCCT TCCTGGAGCG GTACCGCAGC CTCGAGGTCT TCAACGACCC GGAGAGCCTG
CGGCTGATGT GGGAGCGCGG CCTGGTCACG CTCGACGAGA TCGGGGTGCC CGACCGGCCC
GAAGTCCGGC TGCGGTTGGA GCGCTTCCTG CGCGCCCACG GGATCCACGC GAAGCTGCTG
ATCAGGCTCG CCGGGGGAAG CGGTGTCGGT GCGGTCGTCT CCCTGCTGGA CCCGCGGCCC
GGTGCCTTCG GGCCGCGTGA CCGCGCCGTG GGCGCCGTGC TCGCCCGCCA CCTCGGCAAC
CTGCTGCGCT TCTACATCCG GGTGAACCCG GGCCCGGCCG TGACGGCGAA GCTTTCCGCC
CGTGAGCGCG ACGTCGTCCG CCTGGTGGCG GAGGGCCAGT CGAACCGGCA GGTGGCGGAG
GCCCTCTGCA TCAGCATCGA CACGGTCAAG CACCACCTGA CGCACGCGCT CGTGGCGACC
GGCTGCTCCA ACCGCACCCA GCTCGCGCTC GCCTGGCAGC GTGAGATGGG CTCGATGCCG
GCGCCGGGCC TGCCCCGCCC GTAG
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| Protein sequence | MTDRMLSNPD GSPSGHPATG RLAVTMDTSA GVSRPPGVAA PHRAPTMRHA PISATSAVGH
PGARTRPGAV AAGLPGRAPV AARGPQVPRD LALGAAELRG VLRVVEDCER AASLPAFREA
ALDGMARHLG YRHSAFFLGS SPQATFQDAR PTGRGLALRM AGPFLERYRS LEVFNDPESL
RLMWERGLVT LDEIGVPDRP EVRLRLERFL RAHGIHAKLL IRLAGGSGVG AVVSLLDPRP
GAFGPRDRAV GAVLARHLGN LLRFYIRVNP GPAVTAKLSA RERDVVRLVA EGQSNRQVAE
ALCISIDTVK HHLTHALVAT GCSNRTQLAL AWQREMGSMP APGLPRP
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