More than 300 homologs were found in PanDaTox collection
for query gene Plim_3722 on replicon NC_014148
Organism: Planctomyces limnophilus DSM 3776



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_014148  Plim_3722  response regulator receiver  100 
 
 		 143 aa  291  1e-78  Planctomyces limnophilus DSM 3776  Bacteria  normal  1  n/a   
 
 
-
 
NC_013525  Tter_1098  two component transcriptional regulator, winged helix family  40.68 
 
 		 228 aa  85.9  2e-16  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013739  Cwoe_5381  two component transcriptional regulator, winged helix family  39.06 
 
 		 235 aa  85.1  3e-16  Conexibacter woesei DSM 14684  Bacteria  normal  0.0242785  normal  1 
 
 
-
 
NC_008148  Rxyl_3017  two component transcriptional regulator  42.06 
 
 		 225 aa  84.3  5e-16  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_008347  Mmar10_0766  two component transcriptional regulator  38.89 
 
 		 233 aa  84  7e-16  Maricaulis maris MCS10  Bacteria  normal  0.528482  normal  0.302775 
 
 
-
 
NC_012791  Vapar_4622  CheA signal transduction histidine kinase  37.7 
 
 		 2022 aa  83.2  0.000000000000001  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_0198  two component, sigma54 specific, transcriptional regulator, Fis family  38.14 
 
 		 461 aa  82.8  0.000000000000001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_3021  sporulation transcriptional activator Spo0A  36.91 
 
 		 264 aa  82.4  0.000000000000002  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000341276  n/a   
 
 
-
 
NC_007204  Psyc_1818  two component reponse regulator  35.65 
 
 		 125 aa  80.9  0.000000000000005  Psychrobacter arcticus 273-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008825  Mpe_A3186  twitching motility protein  39.2 
 
 		 2092 aa  81.3  0.000000000000005  Methylibium petroleiphilum PM1  Bacteria  normal  0.0988113  normal  0.323736 
 
 
-
 
NC_009943  Dole_0622  two component transcriptional regulator  34.31 
 
 		 240 aa  80.5  0.000000000000006  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
NC_007969  Pcryo_2101  response regulator receiver domain-containing protein  35.65 
 
 		 125 aa  80.5  0.000000000000007  Psychrobacter cryohalolentis K5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008340  Mlg_0669  response regulator receiver protein  37.29 
 
 		 123 aa  80.5  0.000000000000008  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009767  Rcas_4445  two component transcriptional regulator  37.31 
 
 		 229 aa  80.1  0.00000000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.14031 
 
 
-
 
NC_013172  Bfae_09290  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  34.38 
 
 		 229 aa  80.1  0.00000000000001  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_003909  BCE_2749  transcription response regulator-like protein  37.27 
 
 		 221 aa  79  0.00000000000002  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.00061025  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2424  two component transcriptional regulator  31.3 
 
 		 221 aa  78.6  0.00000000000002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0245011  n/a   
 
 
-
 
NC_012034  Athe_1456  two component transcriptional regulator, winged helix family  36.84 
 
 		 223 aa  79  0.00000000000002  Anaerocellum thermophilum DSM 6725  Bacteria  decreased coverage  0.000183373  n/a   
 
 
-
 
NC_007347  Reut_A2623  response regulator receiver  33.06 
 
 		 160 aa  79  0.00000000000002  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_013205  Aaci_2922  two component transcriptional regulator, winged helix family  38.74 
 
 		 230 aa  79  0.00000000000002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.221617  n/a   
 
 
-
 
NC_009338  Mflv_1887  two component transcriptional regulator  35.66 
 
 		 231 aa  79  0.00000000000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.882564  normal  0.344123 
 
 
-
 
NC_007948  Bpro_1136  response regulator receiver domain-containing protein  33.33 
 
 		 132 aa  79  0.00000000000002  Polaromonas sp. JS666  Bacteria  normal  1  normal  0.638067 
 
 
-
 
NC_008709  Ping_1245  two component, sigma54 specific, transcriptional regulator, Fis family protein  37.39 
 
 		 472 aa  79.3  0.00000000000002  Psychromonas ingrahamii 37  Bacteria  normal  0.390474  normal  0.0307837 
 
 
-
 
NC_010338  Caul_4630  two component transcriptional regulator  39.17 
 
 		 235 aa  78.6  0.00000000000003  Caulobacter sp. K31  Bacteria  normal  0.0961185  normal  1 
 
 
-
 
NC_009997  Sbal195_2416  two component transcriptional regulator  40.74 
 
 		 226 aa  78.2  0.00000000000003  Shewanella baltica OS195  Bacteria  normal  0.134995  hitchhiker  0.000110965 
 
 
-
 
NC_010180  BcerKBAB4_5471  two component transcriptional regulator  38.18 
 
 		 221 aa  78.6  0.00000000000003  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.00800002  hitchhiker  0.0013378 
 
 
-
 
NC_007973  Rmet_0669  response regulator receiver domain-containing protein  33.33 
 
 		 167 aa  78.6  0.00000000000003  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00304574  normal  0.832292 
 
 
-
 
NC_008726  Mvan_4844  two component transcriptional regulator  35.16 
 
 		 231 aa  78.6  0.00000000000003  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.312171 
 
 
-
 
NC_009524  PsycPRwf_2155  CheA signal transduction histidine kinase  35.59 
 
 		 1609 aa  77.8  0.00000000000004  Psychrobacter sp. PRwf-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007484  Noc_0126  CheA signal transduction histidine kinase  32.31 
 
 		 1758 aa  77.8  0.00000000000004  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_013124  Afer_0558  two component transcriptional regulator, winged helix family  34.96 
 
 		 237 aa  77.8  0.00000000000004  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_009052  Sbal_2050  two component transcriptional regulator  39.81 
 
 		 226 aa  77.8  0.00000000000004  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_007908  Rfer_1371  response regulator receiver domain-containing protein  32.17 
 
 		 132 aa  77.8  0.00000000000004  Rhodoferax ferrireducens T118  Bacteria  normal  0.019268  n/a   
 
 
-
 
NC_011772  BCG9842_B2563  transcriptional regulatory protein ResD  36.36 
 
 		 221 aa  78.2  0.00000000000004  Bacillus cereus G9842  Bacteria  normal  1  hitchhiker  0.00803163 
 
 
-
 
NC_008709  Ping_1745  two component, sigma54 specific, transcriptional regulator, Fis family protein  35.09 
 
 		 468 aa  78.2  0.00000000000004  Psychromonas ingrahamii 37  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014248  Aazo_5207  winged helix family two component transcriptional regulator  37.61 
 
 		 247 aa  77.8  0.00000000000005  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_012803  Mlut_04130  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  33.9 
 
 		 236 aa  77.8  0.00000000000005  Micrococcus luteus NCTC 2665  Bacteria  normal  0.118973  n/a   
 
 
-
 
NC_011831  Cagg_3265  two component transcriptional regulator, winged helix family  35.09 
 
 		 245 aa  77.4  0.00000000000005  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.45002  normal  1 
 
 
-
 
NC_011992  Dtpsy_2897  CheA signal transduction histidine kinase  36.51 
 
 		 2026 aa  77.8  0.00000000000005  Acidovorax ebreus TPSY  Bacteria  normal  0.855039  n/a   
 
 
-
 
NC_008789  Hhal_1901  response regulator receiver protein  34.71 
 
 		 125 aa  77.8  0.00000000000005  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008740  Maqu_3767  response regulator receiver protein  33.88 
 
 		 130 aa  77.8  0.00000000000005  Marinobacter aquaeolei VT8  Bacteria  normal  0.401563  n/a   
 
 
-
 
NC_007204  Psyc_1813  putative hybrid two-component sensor and regulatory protein  34.19 
 
 		 2284 aa  77.4  0.00000000000006  Psychrobacter arcticus 273-4  Bacteria  normal  0.409027  normal  1 
 
 
-
 
NC_009665  Shew185_2301  two component transcriptional regulator  39.81 
 
 		 226 aa  77.4  0.00000000000006  Shewanella baltica OS185  Bacteria  hitchhiker  0.00729091  n/a   
 
 
-
 
NC_012856  Rpic12D_0564  CheA signal transduction histidine kinase  30.08 
 
 		 2012 aa  77.4  0.00000000000006  Ralstonia pickettii 12D  Bacteria  normal  0.472069  normal  1 
 
 
-
 
NC_008261  CPF_2067  Spo0A protein  37.3 
 
 		 276 aa  77.4  0.00000000000006  Clostridium perfringens ATCC 13124  Bacteria  normal  0.935155  n/a   
 
 
-
 
NC_008262  CPR_1781  Spo0A protein  37.3 
 
 		 276 aa  77.4  0.00000000000006  Clostridium perfringens SM101  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_3354  response regulator receiver protein  31.3 
 
 		 147 aa  77  0.00000000000007  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.878811  normal  1 
 
 
-
 
NC_011725  BCB4264_A4980  DNA-binding response regulator  41.44 
 
 		 232 aa  77.4  0.00000000000007  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_007778  RPB_4173  two component transcriptional regulator  39.85 
 
 		 241 aa  77  0.00000000000007  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.589597  normal  0.523463 
 
 
-
 
NC_012034  Athe_0280  two component transcriptional regulator, winged helix family  34.55 
 
 		 225 aa  77.4  0.00000000000007  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_008148  Rxyl_0783  two component transcriptional regulator  36.84 
 
 		 231 aa  77  0.00000000000007  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU3217  sigma-54 dependent DNA-binding response regulator  33.04 
 
 		 501 aa  77  0.00000000000008  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_008752  Aave_2526  two component transcriptional regulator  37.4 
 
 		 262 aa  77  0.00000000000008  Acidovorax citrulli AAC00-1  Bacteria  normal  0.262723  normal  0.926116 
 
 
-
 
NC_004347  SO_2426  DNA-binding response regulator  38.94 
 
 		 237 aa  77  0.00000000000008  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010682  Rpic_0612  response regulator receiver protein  36.21 
 
 		 152 aa  77  0.00000000000008  Ralstonia pickettii 12J  Bacteria  normal  0.296044  normal  1 
 
 
-
 
NC_011831  Cagg_1858  two component transcriptional regulator, winged helix family  35.25 
 
 		 227 aa  77  0.00000000000008  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011884  Cyan7425_4627  two component transcriptional regulator, LuxR family  36.13 
 
 		 226 aa  77  0.00000000000008  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008312  Tery_4491  two component LuxR family transcriptional regulator  35.94 
 
 		 233 aa  77  0.00000000000008  Trichodesmium erythraeum IMS101  Bacteria  normal  1  normal  0.697305 
 
 
-
 
NC_002936  DET1058  DNA-binding response regulator  38.18 
 
 		 227 aa  77  0.00000000000009  Dehalococcoides ethenogenes 195  Bacteria  decreased coverage  0.000187393  n/a   
 
 
-
 
NC_002939  GSU1320  sigma-54 dependent DNA-binding response regulator  39.67 
 
 		 460 aa  77  0.00000000000009  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_2159  two component transcriptional regulator, winged helix family  32.28 
 
 		 227 aa  77  0.00000000000009  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00177162  n/a   
 
 
-
 
NC_009523  RoseRS_0761  two component transcriptional regulator  35 
 
 		 229 aa  77  0.00000000000009  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.179681 
 
 
-
 
NC_007413  Ava_1498  two component transcriptional regulator  38.46 
 
 		 247 aa  77  0.00000000000009  Anabaena variabilis ATCC 29413  Bacteria  normal  0.220919  normal  1 
 
 
-
 
NC_013730  Slin_2666  two component transcriptional regulator, AraC family  33.91 
 
 		 251 aa  76.6  0.00000000000009  Spirosoma linguale DSM 74  Bacteria  normal  0.21287  normal  0.224489 
 
 
-
 
NC_009831  Ssed_2316  response regulator receiver protein  39.64 
 
 		 226 aa  76.3  0.0000000000001  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.00000147543  hitchhiker  0.000888492 
 
 
-
 
NC_012793  GWCH70_3409  two component transcriptional regulator, winged helix family  37.17 
 
 		 236 aa  76.3  0.0000000000001  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_009077  Mjls_4681  two component transcriptional regulator  36.45 
 
 		 230 aa  76.3  0.0000000000001  Mycobacterium sp. JLS  Bacteria  normal  1  normal  0.354926 
 
 
-
 
NC_011884  Cyan7425_3742  two component transcriptional regulator, winged helix family  37.07 
 
 		 263 aa  76.3  0.0000000000001  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008782  Ajs_3574  CheA signal transduction histidine kinases  36.51 
 
 		 2026 aa  76.6  0.0000000000001  Acidovorax sp. JS42  Bacteria  normal  0.906934  normal  0.231875 
 
 
-
 
NC_011831  Cagg_1351  two component transcriptional regulator, winged helix family  39.09 
 
 		 225 aa  76.3  0.0000000000001  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00188361  unclonable  0.0000000206018 
 
 
-
 
NC_012917  PC1_2692  two component transcriptional regulator, winged helix family  36.67 
 
 		 229 aa  76.3  0.0000000000001  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011663  Sbal223_2046  two component transcriptional regulator, winged helix family  39.81 
 
 		 226 aa  76.6  0.0000000000001  Shewanella baltica OS223  Bacteria  normal  0.095715  hitchhiker  0.000000000691151 
 
 
-
 
NC_007760  Adeh_0411  two component transcriptional regulator  35.97 
 
 		 230 aa  76.6  0.0000000000001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_007947  Mfla_0716  two component transcriptional regulator  41.59 
 
 		 233 aa  76.3  0.0000000000001  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007948  Bpro_1140  CheA signal transduction histidine kinases  37.72 
 
 		 2070 aa  76.3  0.0000000000001  Polaromonas sp. JS666  Bacteria  normal  1  normal  0.607614 
 
 
-
 
NC_010682  Rpic_0616  CheA signal transduction histidine kinase  30.08 
 
 		 2009 aa  76.6  0.0000000000001  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008146  Mmcs_4301  two component transcriptional regulator  36.45 
 
 		 230 aa  76.3  0.0000000000001  Mycobacterium sp. MCS  Bacteria  normal  0.681825  n/a   
 
 
-
 
NC_013522  Taci_0717  two component transcriptional regulator, winged helix family  36.94 
 
 		 226 aa  76.6  0.0000000000001  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  hitchhiker  0.000154116  n/a   
 
 
-
 
NC_012856  Rpic12D_0560  response regulator receiver protein  36.21 
 
 		 165 aa  76.6  0.0000000000001  Ralstonia pickettii 12D  Bacteria  normal  0.595412  normal  1 
 
 
-
 
NC_008321  Shewmr4_1904  two component transcriptional regulator  36.09 
 
 		 226 aa  76.6  0.0000000000001  Shewanella sp. MR-4  Bacteria  hitchhiker  0.00970528  hitchhiker  0.0000356769 
 
 
-
 
NC_008322  Shewmr7_2074  two component transcriptional regulator  36.09 
 
 		 226 aa  76.6  0.0000000000001  Shewanella sp. MR-7  Bacteria  decreased coverage  0.00164535  hitchhiker  0.00140528 
 
 
-
 
NC_008705  Mkms_4387  two component transcriptional regulator  36.45 
 
 		 230 aa  76.3  0.0000000000001  Mycobacterium sp. KMS  Bacteria  normal  0.0316317  normal  1 
 
 
-
 
NC_013132  Cpin_0693  two component transcriptional regulator, winged helix family  36.45 
 
 		 229 aa  75.9  0.0000000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010501  PputW619_2462  response regulator receiver protein  37.27 
 
 		 176 aa  75.9  0.0000000000002  Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010003  Pmob_0095  two component transcriptional regulator  35.51 
 
 		 224 aa  75.5  0.0000000000002  Petrotoga mobilis SJ95  Bacteria  normal  1  n/a   
 
 
-
 
NC_003910  CPS_3065  DNA-binding response regulator  37.19 
 
 		 237 aa  75.9  0.0000000000002  Colwellia psychrerythraea 34H  Bacteria  decreased coverage  0.00140102  n/a   
 
 
-
 
NC_014150  Bmur_0931  response regulator receiver protein  32.46 
 
 		 430 aa  75.5  0.0000000000002  Brachyspira murdochii DSM 12563  Bacteria  normal  1  n/a   
 
 
-
 
NC_013730  Slin_1037  response regulator receiver protein  37.17 
 
 		 247 aa  75.5  0.0000000000002  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007005  Psyr_3084  response regulator receiver:transcriptional regulatory protein, C-terminal  36.51 
 
 		 229 aa  75.9  0.0000000000002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.692731  normal  1 
 
 
-
 
NC_011661  Dtur_0154  two component transcriptional regulator, winged helix family  36.52 
 
 		 220 aa  75.9  0.0000000000002  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.443854  n/a   
 
 
-
 
NC_013525  Tter_0790  two component, sigma54 specific, transcriptional regulator, Fis family  32.41 
 
 		 466 aa  75.9  0.0000000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011830  Dhaf_4841  response regulator receiver protein  38.18 
 
 		 118 aa  75.9  0.0000000000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.202718  n/a   
 
 
-
 
NC_011831  Cagg_2051  two component transcriptional regulator, winged helix family  34.75 
 
 		 247 aa  75.5  0.0000000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.520505  normal  1 
 
 
-
 
NC_007760  Adeh_2635  response regulator receiver domain-containing protein  31.85 
 
 		 131 aa  75.5  0.0000000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.0563539  n/a   
 
 
-
 
NC_013946  Mrub_0031  two component transcriptional regulator, winged helix family  36.52 
 
 		 234 aa  75.9  0.0000000000002  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007912  Sde_3629  putative CheA signal transduction histidine kinases  33.33 
 
 		 2336 aa  75.5  0.0000000000002  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013061  Phep_2522  response regulator receiver  34.75 
 
 		 229 aa  75.5  0.0000000000002  Pedobacter heparinus DSM 2366  Bacteria  normal  0.661278  normal  1 
 
 
-
 
NC_008009  Acid345_0509  two component transcriptional regulator  33.87 
 
 		 232 aa  75.5  0.0000000000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.163629  normal  1 
 
 
-
 
NC_008312  Tery_4937  two component transcriptional regulator  38.46 
 
 		 257 aa  75.5  0.0000000000002  Trichodesmium erythraeum IMS101  Bacteria  normal  1  normal  0.565868 
 
 
-
 
NC_012850  Rleg_3011  two component transcriptional regulator, winged helix family  38.14 
 
 		 233 aa  75.5  0.0000000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  1 
 
 
-
 
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