| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3021 |
|---|
| Symbol | |
|---|
| ID | 7260032 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 3242511 |
|---|
| End bp | 3243305 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643562941 |
|---|
| Product | sporulation transcriptional activator Spo0A |
|---|
| Protein accession | YP_002459480 |
|---|
| Protein GI | 219669045 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
|---|
| TIGRFAM ID | [TIGR02875] sporulation transcription factor Spo0A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.000000341276 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAGAA AAATCAAAAT TGTCGTCGCT GACGATAACC GTAATTTGTG CCAAATGTTA
CAGGATTTTC TCCAAAGTCA GGATGACCTC GAGGTGATAG GGATAGCGTA CAATGGAGTC
GAGGCTTGGG ATCTGATTCA ATCTCAGGAA CCGGATCTTG TCATCATCGA TTTGGTTATG
CCGAGTCTGG ACGGGTTAGG TGTTTTGGAA AGAATAAACG GACGGACGAC GGCTTCACGG
CCCAAGGTTA TCATGCTTAC CGCCTTTGGT CAGGAATCCT TAACCCATCA GGCCATGATA
CTTGGCGTAG ATTATTTTAT TCTGAAGCCT TTTGATCTGG AGATTCTGGG CAAGAGGATC
CGTAGTCTGA CCCAAAGCGC ACCCTCCTCA TCGACTCCGA TGACTTCGGC AGTGAATGCT
GTGACCAACG CAGGCACAAG TGTTAATTTA GGGGCAGAAG TGACGAATAT GATGCATCAA
ATCGGCATTC CAGCTCATGT CAAGGGATAC CAGTACATAA GAGATGCGAT TCTCATGGTC
GTCGAAGATG TGTCTTTATT GGGGGCGGTA ACCAAGGAGC TCTATCCGGC CATTGCCAAG
AAATATGATA CTGCACCCAG CCGTGTGGAG CGAGGTATCC GGCATGCCAT CGAATTGGCA
TGGGAGCGGG GACATACGGA GACGCTAAAA CGCATTTTCG GATATTCTAT GAATATTGAA
CGACAAAAAC CAACCAATTC AGAATTTGTT GCCCTTCTTG CCGACAAATT GAGGGTTATG
AGTAAAGTAA GTTAA
|
|---|
| Protein sequence | MGRKIKIVVA DDNRNLCQML QDFLQSQDDL EVIGIAYNGV EAWDLIQSQE PDLVIIDLVM
PSLDGLGVLE RINGRTTASR PKVIMLTAFG QESLTHQAMI LGVDYFILKP FDLEILGKRI
RSLTQSAPSS STPMTSAVNA VTNAGTSVNL GAEVTNMMHQ IGIPAHVKGY QYIRDAILMV
VEDVSLLGAV TKELYPAIAK KYDTAPSRVE RGIRHAIELA WERGHTETLK RIFGYSMNIE
RQKPTNSEFV ALLADKLRVM SKVS
|
|---|
| |