| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2522 |
|---|
| Symbol | |
|---|
| ID | 8253629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 2925995 |
|---|
| End bp | 2926684 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644936172 |
|---|
| Product | response regulator receiver |
|---|
| Protein accession | YP_003092788 |
|---|
| Protein GI | 255532416 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.661278 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCG TAAAACAGAA GATACTTATT GTTGATGATG AACCCGATAT TTTAGAATTA
ATAGAATACA ACTTAAAAAA AGAAGGTTAT CAGGTTTATC TGGCGGGTAA CGGACAGGAA
GGGATTACGA TTGCGAAAAA GGTACATCCT GATCTGATCA TCCTGGATAT TATGATGCCT
AAAATGGATG GGATCGAAGC TTGCAGATTG ATGCGTGCCA TTCCTGAATT TAAAAATACA
TTTATGGTAT TCCTTACTGC CCGCAGTGAA GAATATTCCG AGATTGCCGG TTTTAACGTG
GGTGCTGATG ATTACATCGC CAAACCCATT AAACCCCGTG CCCTGGTAAG CCGTATCAAT
GCCATCTTAA GAAGAAATTC AAGTACGGAC GACGTGTCAG ACAATAAGGT GGAAATAGGG
GACCTGGTAA TCGACAGGGA AGCTTACCTG GTGTACCAGA ACGGGCAAAA GGTAGTGCTG
GCTAAAAAAG AATTTGAACT GTTGTACCTT TTGGCCTCTA AACCAGGTAA GGTATATACA
CGCGAATCTA TATTAAAGAA TATCTGGGAA GATTCTGTAG TGGTAACCAA CCGTACCATT
GATGTACATA TCCGTAAATT ACGCGAGAAA CTGGGCGAAA CCTACGTCGC TACCGTAAAA
GGAGTAGGGT ATAAGTTCGA GTTGTCTTAG
|
|---|
| Protein sequence | MSTVKQKILI VDDEPDILEL IEYNLKKEGY QVYLAGNGQE GITIAKKVHP DLIILDIMMP
KMDGIEACRL MRAIPEFKNT FMVFLTARSE EYSEIAGFNV GADDYIAKPI KPRALVSRIN
AILRRNSSTD DVSDNKVEIG DLVIDREAYL VYQNGQKVVL AKKEFELLYL LASKPGKVYT
RESILKNIWE DSVVVTNRTI DVHIRKLREK LGETYVATVK GVGYKFELS
|
|---|
| |