| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3354 |
|---|
| Symbol | |
|---|
| ID | 4689617 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 3554336 |
|---|
| End bp | 3554779 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639836367 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_983572 |
|---|
| Protein GI | 121606243 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.878811 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATCCAG TTGCTTCGGC GGCTGCAAAA ACAGGAGTAA ACACAGTGAG CATTCCCAGT
TCCGGACTGA AGGTGTTGGT CATCGATGAC AGCAATACGA TCAGGCGCAG CGCCGAGATT
TTTCTGAAAC AGGGAGGTCA TGAAGTATTG CTGTCAGAAG ATGGCTTTGA CGCCCTGTCC
AAGGTGAATG ACTACCAGCC CGATCTGATT TTTTGCGATA TTTTGATGCC GCGCCTTGAT
GGCTACCAGA CCTGTGCAAT CATCAAGCGC AATGCAAGAT TTTCGGATGT TCCCATTGTG
ATGCTGTCCT CCAAGGATGG CGTATTCGAC AAGGCACGTG GCCGCATGGT GGGCTCGCAG
GATTACCTGA CCAAGCCGTT CACCAAGGAT CAGTTGCTGC AAACCGTTCA GTCTTTGGGC
ACCGTTAAAC ATAAGGAAGT GTGA
|
|---|
| Protein sequence | MNPVASAAAK TGVNTVSIPS SGLKVLVIDD SNTIRRSAEI FLKQGGHEVL LSEDGFDALS
KVNDYQPDLI FCDILMPRLD GYQTCAIIKR NARFSDVPIV MLSSKDGVFD KARGRMVGSQ
DYLTKPFTKD QLLQTVQSLG TVKHKEV
|
|---|
| |