More than 300 homologs were found in PanDaTox collection
for query gene Hhal_1901 on replicon NC_008789
Organism: Halorhodospira halophila SL1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008789  Hhal_1901  response regulator receiver protein  100 
 
 
125 aa  255  1e-67  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_0669  response regulator receiver protein  71.9 
 
 
123 aa  182  1.0000000000000001e-45  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_4150  response regulator receiver protein  61.98 
 
 
125 aa  165  2e-40  Polaromonas sp. JS666  Bacteria  normal  normal  0.583085 
 
 
-
 
NC_011662  Tmz1t_2649  response regulator receiver protein  60.83 
 
 
122 aa  155  2e-37  Thauera sp. MZ1T  Bacteria  normal  0.857048  n/a   
 
 
-
 
NC_010524  Lcho_0237  response regulator receiver protein  59.17 
 
 
124 aa  154  4e-37  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000555979 
 
 
-
 
NC_007298  Daro_1632  response regulator receiver  60.83 
 
 
123 aa  150  5.9999999999999996e-36  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3778  response regulator receiver domain-containing protein  57.5 
 
 
124 aa  147  6e-35  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_2054  response regulator receiver protein  53.28 
 
 
140 aa  138  1.9999999999999998e-32  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.0880044 
 
 
-
 
NC_009675  Anae109_2029  response regulator receiver protein  53.72 
 
 
124 aa  134  4e-31  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.371136 
 
 
-
 
NC_013730  Slin_2044  response regulator receiver protein  50 
 
 
123 aa  128  3e-29  Spirosoma linguale DSM 74  Bacteria  normal  0.0300859  normal  0.405857 
 
 
-
 
NC_013501  Rmar_1501  response regulator receiver protein  50.42 
 
 
132 aa  124  3e-28  Rhodothermus marinus DSM 4252  Bacteria  normal  0.153095  n/a   
 
 
-
 
NC_009632  SaurJH1_1784  alkaline phosphatase synthesis transcriptional regulatory protein  50 
 
 
234 aa  124  4.0000000000000003e-28  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.561076  n/a   
 
 
-
 
NC_009487  SaurJH9_1750  two component transcriptional regulator  50 
 
 
234 aa  124  4.0000000000000003e-28  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0567  two component transcriptional regulator, winged helix family  46.4 
 
 
225 aa  124  5e-28  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.463355  n/a   
 
 
-
 
NC_007760  Adeh_4009  two component transcriptional regulator  49.17 
 
 
230 aa  124  6e-28  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  decreased coverage  0.00751412  n/a   
 
 
-
 
NC_009720  Xaut_2427  response regulator receiver protein  47.9 
 
 
159 aa  123  7e-28  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.468058 
 
 
-
 
NC_008688  Pden_5113  response regulator receiver protein  46.28 
 
 
121 aa  123  7e-28  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_3538  two component transcriptional regulator, winged helix family  47.2 
 
 
237 aa  123  9e-28  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011891  A2cp1_4151  two component transcriptional regulator, winged helix family  48.33 
 
 
230 aa  122  2e-27  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP1256  alkaline phosphatase synthesis transcriptional regulatory protein PhoP  51.67 
 
 
236 aa  122  2e-27  Staphylococcus epidermidis RP62A  Bacteria  normal  0.577358  n/a   
 
 
-
 
NC_003909  BCE_5615  DNA-binding response regulator YycF  50.43 
 
 
235 aa  122  2e-27  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5319  DNA-binding response regulator YycF  50.43 
 
 
235 aa  122  2e-27  Bacillus anthracis str. Sterne  Bacteria  normal  0.169223  n/a   
 
 
-
 
NC_005957  BT9727_5147  response regulator  50.43 
 
 
235 aa  122  2e-27  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00168683  n/a   
 
 
-
 
NC_011772  BCG9842_B5346  DNA-binding response regulator YycF  50.43 
 
 
235 aa  122  2e-27  Bacillus cereus G9842  Bacteria  hitchhiker  0.000000234523  hitchhiker  0.00000000000323141 
 
 
-
 
NC_009674  Bcer98_4006  two component transcriptional regulator  50.43 
 
 
235 aa  122  2e-27  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.010356  n/a   
 
 
-
 
NC_006274  BCZK5163  response regulator  50.43 
 
 
235 aa  122  2e-27  Bacillus cereus E33L  Bacteria  hitchhiker  0.00196509  n/a   
 
 
-
 
NC_011658  BCAH187_A5650  DNA-binding response regulator YycF  50.43 
 
 
235 aa  122  2e-27  Bacillus cereus AH187  Bacteria  hitchhiker  0.00563499  n/a   
 
 
-
 
NC_011773  BCAH820_5572  DNA-binding response regulator YycF  50.43 
 
 
235 aa  122  2e-27  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.81316e-29 
 
 
-
 
NC_011145  AnaeK_4125  two component transcriptional regulator, winged helix family  48.33 
 
 
230 aa  122  2e-27  Anaeromyxobacter sp. K  Bacteria  normal  0.125271  n/a   
 
 
-
 
NC_012793  GWCH70_3409  two component transcriptional regulator, winged helix family  46.4 
 
 
236 aa  122  2e-27  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5715  DNA-binding response regulator YycF  50.43 
 
 
235 aa  122  2e-27  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.656882  n/a   
 
 
-
 
NC_011725  BCB4264_A5589  DNA-binding response regulator YycF  50.43 
 
 
235 aa  122  2e-27  Bacillus cereus B4264  Bacteria  normal  0.0469644  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5259  two component transcriptional regulator  50.43 
 
 
235 aa  122  2e-27  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000559572  n/a   
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  49.18 
 
 
229 aa  120  6e-27  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.834843 
 
 
-
 
NC_003909  BCE_4720  DNA-binding response regulator PhoP  51.24 
 
 
239 aa  120  8e-27  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_1237  two component transcriptional regulator, winged helix family  48.31 
 
 
232 aa  120  8e-27  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4714  DNA-binding response regulator PhoP  51.24 
 
 
239 aa  119  9e-27  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4484  DNA-binding response regulator PhoP  51.24 
 
 
239 aa  119  9e-27  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4319  alkaline phosphatase synthesis response regulator  51.24 
 
 
239 aa  119  9e-27  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4330  alkaline phosphatase synthesis response regulator  51.24 
 
 
239 aa  119  9e-27  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4833  DNA-binding response regulator PhoP  51.24 
 
 
239 aa  119  9e-27  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0982965  n/a   
 
 
-
 
NC_011773  BCAH820_4704  DNA-binding response regulator PhoP  51.24 
 
 
239 aa  119  9e-27  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000000000673192 
 
 
-
 
NC_010184  BcerKBAB4_4419  two component transcriptional regulator  51.24 
 
 
239 aa  119  9.999999999999999e-27  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2333  two component transcriptional regulator  50.43 
 
 
232 aa  119  9.999999999999999e-27  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_0573  response regulator receiver protein  43.44 
 
 
129 aa  119  9.999999999999999e-27  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.087024  n/a   
 
 
-
 
NC_011772  BCG9842_B0539  DNA-binding response regulator PhoP  51.24 
 
 
239 aa  119  9.999999999999999e-27  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.000130788 
 
 
-
 
NC_009674  Bcer98_3274  two component transcriptional regulator  52.07 
 
 
238 aa  119  9.999999999999999e-27  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_2226  response regulator receiver protein  43.44 
 
 
129 aa  119  9.999999999999999e-27  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.561592  normal  0.814785 
 
 
-
 
NC_011725  BCB4264_A4699  DNA-binding response regulator PhoP  51.24 
 
 
239 aa  119  9.999999999999999e-27  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_0415  two component transcriptional regulator  52.29 
 
 
231 aa  119  1.9999999999999998e-26  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.777838 
 
 
-
 
NC_010001  Cphy_1954  two component transcriptional regulator  47.2 
 
 
229 aa  119  1.9999999999999998e-26  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.000155813  n/a   
 
 
-
 
NC_010180  BcerKBAB4_5511  two component transcriptional regulator  48.78 
 
 
236 aa  119  1.9999999999999998e-26  Bacillus weihenstephanensis KBAB4  Bacteria  normal  normal  0.567595 
 
 
-
 
NC_008346  Swol_0951  response regulator receiver protein  47.41 
 
 
239 aa  119  1.9999999999999998e-26  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.0000000111905  n/a   
 
 
-
 
NC_007413  Ava_4431  response regulator receiver domain-containing protein  46.77 
 
 
125 aa  117  6e-26  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_3394  two component transcriptional regulator, winged helix family  48.33 
 
 
230 aa  117  6e-26  Clostridium cellulolyticum H10  Bacteria  normal  0.103692  n/a   
 
 
-
 
NC_012793  GWCH70_2675  two component transcriptional regulator, winged helix family  48.33 
 
 
234 aa  117  6e-26  Geobacillus sp. WCH70  Bacteria  normal  0.661044  n/a   
 
 
-
 
NC_002976  SERP2534  DNA-binding response regulator YycF  45.3 
 
 
233 aa  117  7e-26  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_0018  response regulator receiver  45.3 
 
 
233 aa  117  7e-26  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_0018  two component transcriptional regulator  45.3 
 
 
233 aa  117  7e-26  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.70243  n/a   
 
 
-
 
NC_009428  Rsph17025_0504  response regulator receiver protein  43.44 
 
 
129 aa  116  9.999999999999999e-26  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0548558  normal  0.11151 
 
 
-
 
NC_008751  Dvul_1911  two component transcriptional regulator  43.65 
 
 
229 aa  116  9.999999999999999e-26  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.258551 
 
 
-
 
NC_013223  Dret_0467  two component transcriptional regulator, winged helix family  45.9 
 
 
230 aa  115  1.9999999999999998e-25  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_1115  two component transcriptional regulator, winged helix family  48.31 
 
 
243 aa  115  1.9999999999999998e-25  Cyanothece sp. PCC 7425  Bacteria  normal  0.0950226  normal 
 
 
-
 
NC_008554  Sfum_0707  two component transcriptional regulator  42.97 
 
 
227 aa  115  1.9999999999999998e-25  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.598521  normal 
 
 
-
 
NC_011729  PCC7424_4207  two component transcriptional regulator, winged helix family  47.62 
 
 
247 aa  114  3e-25  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011899  Hore_21640  two component transcriptional regulator, winged helix family  44.92 
 
 
226 aa  114  3e-25  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000000176926  n/a   
 
 
-
 
NC_008312  Tery_0954  two component transcriptional regulator  48.31 
 
 
243 aa  114  3e-25  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0817018 
 
 
-
 
NC_010424  Daud_1897  two component transcriptional regulator  48.28 
 
 
227 aa  114  3.9999999999999997e-25  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.151466  n/a   
 
 
-
 
NC_008530  LGAS_0064  DNA-binding response regulator  46.15 
 
 
235 aa  114  3.9999999999999997e-25  Lactobacillus gasseri ATCC 33323  Bacteria  normal  0.611294  normal 
 
 
-
 
NC_008554  Sfum_2892  two component transcriptional regulator  45.83 
 
 
227 aa  114  3.9999999999999997e-25  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.0239565 
 
 
-
 
NC_011004  Rpal_5261  two component transcriptional regulator, winged helix family  44.35 
 
 
237 aa  114  5e-25  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.909356  n/a   
 
 
-
 
NC_009485  BBta_1991  two component transcriptional regulator  43.55 
 
 
235 aa  114  5e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_0783  two component transcriptional regulator  46.67 
 
 
231 aa  113  6.9999999999999995e-25  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_2695  response regulator receiver domain-containing protein  43.22 
 
 
186 aa  113  7.999999999999999e-25  Jannaschia sp. CCS1  Bacteria  decreased coverage  0.00269866  normal  0.78823 
 
 
-
 
NC_011830  Dhaf_2286  two component transcriptional regulator, winged helix family  48.76 
 
 
231 aa  113  8.999999999999998e-25  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000000000188753  n/a   
 
 
-
 
NC_007413  Ava_1878  two component transcriptional regulator  48.31 
 
 
242 aa  113  8.999999999999998e-25  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.559477 
 
 
-
 
NC_007517  Gmet_2308  response regulator receiver protein  44.54 
 
 
123 aa  113  8.999999999999998e-25  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_0511  phosphate regulon transcriptional regulatory protein phoB  42.74 
 
 
234 aa  112  1.0000000000000001e-24  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.473137 
 
 
-
 
NC_012034  Athe_1456  two component transcriptional regulator, winged helix family  43.59 
 
 
223 aa  112  1.0000000000000001e-24  Anaerocellum thermophilum DSM 6725  Bacteria  decreased coverage  0.000183373  n/a   
 
 
-
 
NC_011894  Mnod_7423  two component transcriptional regulator PhoB, winged helix family  48.33 
 
 
234 aa  112  1.0000000000000001e-24  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4918  two component transcriptional regulator  44.35 
 
 
234 aa  113  1.0000000000000001e-24  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.134814 
 
 
-
 
NC_012803  Mlut_03750  PhoP-like protein  46.55 
 
 
226 aa  113  1.0000000000000001e-24  Micrococcus luteus NCTC 2665  Bacteria  normal  0.181369  n/a   
 
 
-
 
NC_014248  Aazo_0581  winged helix family two component transcriptional regulator  48.31 
 
 
242 aa  112  1.0000000000000001e-24  'Nostoc azollae' 0708  Bacteria  normal  0.296955  n/a   
 
 
-
 
NC_010718  Nther_0251  response regulator receiver protein  38.46 
 
 
126 aa  112  2.0000000000000002e-24  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.102048 
 
 
-
 
NC_007604  Synpcc7942_1453  two component transcriptional regulator  48.31 
 
 
244 aa  112  2.0000000000000002e-24  Synechococcus elongatus PCC 7942  Bacteria  normal  0.952418  normal  0.0249242 
 
 
-
 
NC_013161  Cyan8802_2353  two component transcriptional regulator, winged helix family  47.46 
 
 
243 aa  112  2.0000000000000002e-24  Cyanothece sp. PCC 8802  Bacteria  normal  0.0794558  normal 
 
 
-
 
NC_007964  Nham_0640  two component transcriptional regulator  43.55 
 
 
233 aa  112  2.0000000000000002e-24  Nitrobacter hamburgensis X14  Bacteria  normal  0.772339  n/a   
 
 
-
 
NC_011726  PCC8801_2302  two component transcriptional regulator, winged helix family  47.46 
 
 
243 aa  112  2.0000000000000002e-24  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008262  CPR_0609  DNA-binding response regulator  43.7 
 
 
231 aa  112  2.0000000000000002e-24  Clostridium perfringens SM101  Bacteria  hitchhiker  0.0000282114  n/a   
 
 
-
 
NC_010001  Cphy_1986  two component transcriptional regulator  41.94 
 
 
240 aa  112  2.0000000000000002e-24  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_0483  two component transcriptional regulator  41.67 
 
 
229 aa  112  2.0000000000000002e-24  Maricaulis maris MCS10  Bacteria  normal  0.342081  normal 
 
 
-
 
NC_008576  Mmc1_1893  two component transcriptional regulator  42.98 
 
 
235 aa  112  2.0000000000000002e-24  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.203788 
 
 
-
 
NC_002939  GSU2219  response regulator  42.86 
 
 
123 aa  111  3e-24  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1658  two component transcriptional regulator, winged helix family  47.5 
 
 
230 aa  111  3e-24  Clostridium cellulolyticum H10  Bacteria  normal  0.515101  n/a   
 
 
-
 
NC_013173  Dbac_2662  two component transcriptional regulator, winged helix family  39.17 
 
 
231 aa  111  3e-24  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_0893  winged helix family two component transcriptional regulator  42.74 
 
 
233 aa  111  3e-24  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_1955  two component transcriptional regulator, winged helix family  43.86 
 
 
236 aa  111  4.0000000000000004e-24  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.295041  normal 
 
 
-
 
NC_010338  Caul_4546  two component transcriptional regulator  43.33 
 
 
230 aa  111  4.0000000000000004e-24  Caulobacter sp. K31  Bacteria  normal  normal  0.281853 
 
 
-
 
NC_008261  CPF_0623  DNA-binding response regulator  43.7 
 
 
231 aa  111  4.0000000000000004e-24  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000212568  n/a   
 
 
-
 
NC_008532  STER_1116  DNA-binding response regulator  46.96 
 
 
235 aa  111  4.0000000000000004e-24  Streptococcus thermophilus LMD-9  Bacteria  normal  0.310768  n/a   
 
 
-
 
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