| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1140 |
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| Symbol | |
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| ID | 4011878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 1177819 |
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| End bp | 1184031 |
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| Gene Length | 6213 bp |
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| Protein Length | 2070 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637940818 |
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| Product | CheA signal transduction histidine kinases |
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| Protein accession | YP_547990 |
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| Protein GI | 91787038 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.607614 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATCCA ACGTCCCGAA TTCAAAAACT GCCGAGTCTG ACCTCGCTGT CAACGATCTG
GGCCCGCTGG CTTGGGTGCT TGACGAACTT CGCAAGTCAC TGGAAGGTGC AGCCAAGGCG
CTGAAGCGCT TCGTGCGGGA CGCCGAGGCT GCACGGGGCT CCGATCTCGC GGCGATTGAC
GCGAGCCAGT TGCGGATCGC GCGCCAGCAG TTGCATCAGG CTGTAGGTGC GCTGGAGATG
GTGGGGCTGC CAGGGCCTGC GCTGGTGCTG CGCGCCATGG AGGCCGCGGT CCAGAAGTTT
GTGCAGCAAC CCGAGCAATG CAGCCAGGAT GCCGCCGCGA AGATCGAGCG TGCCAGCTTT
GCGTTGACGG AATACCTCGA AGGTGTGCTG GCGGACAAGC CCGTGTCTGC AGTTTCACTG
TTCCCGCAGT ACCGCGAAGT CCAGGAACTG GTGCGTGCGG ACCGCATTCA CCCTGCCGAC
CTGTGGCCGT TTGAGTGGCG CTGGCTCGAA CCTGAACTGG CTGAGACGGC TGAACCGCGG
AACTACGACA GCGGCGCGCG TGCCTTGCTG GACCAGTCGG TGCTCCAGCT CATGAAGGGC
AGGGCGCCCG AGGCTGCGCG CAACCTCAAG GACTTGAGTC TTGGCTTTTC TGCCAGGCAG
GCCGATCGCC AGCCCCGGAT TTTCTGGAAA ATTGCGGCGG CTTATTTTGA AGCTGTCGAG
CATGATTTGC TGGCCACCGA TCTGTATGTC CGGCGCGCTG CATCCCGGAT ATTGCTTCAA
TATGCCTCGC TGGGCAAAGG TGATGCCGCG ATATCAGACC GCCTTGCGCA GGATCTGCTC
TTTTTCTGCG CGCAGGCGGT CTCTACCCGG GCCGGTGACA CCCCGGTTCT GTCCGCCGTC
CGATCGATGT ATGGTCTCAA CCGGTTCAAG CCGGTGGACT ACGAACTTGT TCAGTTTGGC
CGCTTTGATC CGGCCCTGCT GGCTCAGGCG CGCAAACGGA TTACCTCGGC CAAGGAAGCG
TGGTCGTCAC TTTCTGCCGG GGACGTCAGC AAGCTCAAGT CGGTTGGTGA GCAGTTCAGT
CTGGTGTCTG ACTCCCTGCT CAAACTTCAT CCACCGAGCG CGCCTTTTGC GCAAACCTTG
ACCCGAGCGA TCGAAACCAC GACCCGCTCC GCCAAGCCAC CCGGCATTGA ACTGGCGATG
GAGGTCGCGA CCTCGGTCCT TTATCTGGAA GCTGCATTTG ACGACCTGGA TCCCAACGAT
CCCCAGTTGG CGGTGCGGAC AACGAATTTG GCAGAACGCC TGGAAGGCGT CCGGGCGGGC
GGTGAGTCTC AGCCGATGGA AAGCTGGATG GAAGAGCTGT ACCGACGCGT CAGCGATAAG
CAGACCATGG GCAGTGTGGT GGGCGAGTTG CGCGGATCTC TGGGCGAACT CGAAAAGGCA
CTGGATGTGT TCTTTCGCAA TCCGCAGGAC AGGACCGCCC TGCAGGCAGT ACCCGGGCAG
CTTTCCCAGA TGCGCGGCGT GTTGTCGGTA CTGGGTCTTG ATCAGGCATC GCATGCAGTT
TCACGCATGA AGGAAACCGT GGAGCAAATG CTTGTCACCG AAATTGACGA GCAACTGGCG
CGGACTGCTG GCACATTTGA TCACCTCGGT AATAACCTGG GTGCGCTGAG TTTCCTGATT
GACATGCTCA ATTACCAGCC GGTGCTGGCA AAAAAACTGT TTGTCTATGA TGATGAAAAA
GGTGAACTCA AGCCCCTGAT GGGCCGGACG CAAAGCCCGC CGAGCGCCGC GTCTACCGTG
ACGGTGAACA GTGATCTGTT GTCGCGCGAG CTGATCTCGG TAGTGGAGGA GGCCGGGGTC
GGCGCGAGCG ATGAAAACCT CACTGGCAGA CTGGACGCGC TGGCCACGCA CGCGGCGCTG
GCCGAGCAGC CTGCCCTGGC CCAGAGCGCC CGGGAGGCGG CGAAGGCGGT ATCGGCCAAC
AATGCCGACG CCGCCGCTGT TGCGTTGACA TCGCTGGCAT CCTCGGTGAT GCAGGCACCC
GCTGCACCGG CCGGCCCGCT GGCTTCCGCA GATTTTGAAG AAGATGACCT GCGTGATATT
TTCCTTGAAG AGGCGCGCGA GGTCGTCGGC AATGGCCAGG AAGCCCTTTT GGCGTTGGCA
AGCGATTCCG GCGATGTGGC CCAACTGACG GTGCTGCGGC GCGCTTTTCA CACGCTCAAA
GGCAGTTCGC GAATGGTCGG GCTCAACGAG TTCGGCGAAG CAGCATGGTC GCTCGAGCAA
ATGCTCAATA GCTGGCTGGC GGACCAGAAA ACTGCAACCG ATGAGTTCAA GAGCCTGGCC
ACGGAGGCCA TGACCGGTTT TGCGAAATGG ATTGAAGATA TTGCCGCGAA CGAGGATGCT
GCGTGGTCCG CCTCAGCCTT CCGCAGCAGC GCTGACGCCA TGCGCACTGC CGGTCACTAC
GCCCCCTTGA ACCTGTTTGC CCCGGCCGAA GTGCCCAGCT CTGCCGTAAC CGTCGATGAC
ACGGCGATGG CTGGAACGCT TGAATTGCTG GAACTTCAAC TTGAATCGGG CGTCCCCGAT
CTTGCCGGCA CTGGGGCGCC TGCCGACGCG GCTGTCGTTG AGTCTCCTTT TGAGTTCAAT
CTCGACTTTG ACGATGCCAT GGATGCCGCA GCGCCAGTTA CCGCATCTGC AATGGATATC
GAAGGTATTG ATTTCGACAG CCTCTCGGCG CTTTCTGCGG GTAGCGGCGC GCCAGCTGAT
TCCACCGCTC ATCCGGTTGA GGATGAGTTT CTGAGCGTGT CGCTTGAGCC GGAGTCTGGG
CAGGCGGTTG AATTGTCGGT GGAGGATTTT GACAAGCACT TCCATCTGGA CACTGTGGAC
GCCGTAGAGG TTGTGGAGAT TCTGACGCCC GATCAGGCCA TGCCTGCCGG GTTTGAATTC
CCATCCGCCG AACTGGTTGC GACCTTGCCT GAGGCGGTGG ATGCCGCGGG GATATTCGAG
GCGCTTGAGC CTGCCCCGTC GCAATTTGAT GAACTTCCGG ATGCGCAGGA AATTGCGGCG
TTTGAGGATT CCCTCAGTGG CCTTTTGCAG GTCGACGGCA ATAGTGATGA GCAAGTCAAG
GTCATTGGGG CGCTGCGCAT AGGCATTCCT CTTTACAACG TCTATTTGAA CGAGGCCGAT
GAGTGGTCGC GCCGACTGGT GATGGAAGTC GCCGAATGGG TGATTGAGCG CAACCAGCCG
GTCAGTGATT CCACGGTGGC GCTTGCCCAT TCCCTGGCGG GCAGCTCTGC GACGGTCGGG
TTCCATGCAT TGTCGGAAAT GGCCCGGGCG CTTGAGCATG CACTGCAGCA GTCGCAGGCT
CACCACCGCA ATGGCGCAGC CAAGTATGGC CAGGTCTTCG TGGACGCGGC GGAAGACATA
CGCCGGTTGC TGCACCAGTT TGCCGCCGGC TTCCTCAAGG AGGCCGACAG CGGTGTGCTT
GAACGCTTGC GTCAACTGGA CTTCTTCGAC TCGGTTCTGC CGCCCGCGGG CGAATTTTCC
GAACTTGAGT TCCCGCCTGA AGCCCCACCG GCGGAGGAGG TCGGCATTGA ACCGGCCCAA
CCGCTGGAAG CTGAAATCCC GGAAGCCACC CTGGCGGCAG CATCCGCTCC GGATGCACCG
CCCCCGGCGC CCGCAGCAGT CATTGCGACG CCAGTACGGC TGGTGCCATC GGCGCCTGGT
CTGGTGACGG CTGCGACCCG GGCCTCGATT GCTGCCGCAG CCTCTGCGTG GCGGGATGAG
GAAGCTGAAG ACGATATTGA CGCGATCGAT GCCATCGATC CGGATCTGTT TCCGATTTTT
GAAGAAGAAG GCGCAGAGCT CATGCCCCAA CTGGGCGGCG CGTTGCGGCA ATGGGCAGCC
CGGCCCGACA ACCAGGGCGC GCGCATGGAG GTTCTGCGCG CACTGCATAC CCTCAAGGGC
AGTGCGCGTC TGGCGGGTGC CTTGCGTCTG GGTGAAATGG CTCACCGGAT CGAATCGGAA
ATCGAGCATC TGGGCTCCGA CGCGGCCGCC ACCCAGGAAT TCGAACCGCT GCTGACGCGT
TTTGATGCGA TGCAGGCCAC TTTTGAAGAC TTGCGACGTG CTGATGCCGC GGCGGCGGCC
GTACCCTTGC CTCCGCTGGC TGCCGTTGAG GCGCCAGCCG AGGCAGCCGC CCCTGTGGCG
TCAACGATTG CGCAGGAGGC CCGGCAGCCC CTGGCTAAAG AGCCAGCCGT CGCTGGTACA
AGTACCAGCG CCAGTGCCGG AAGAAAACTG GCAATTCCCG CGCCGCAAGC CATGGCCATG
CAGCCCCTGC GCCAGGCGGC AACAGCTTCC ATCCGTGTGC GGTCCCAGTT GCTTGACCGG
ATGGTCACCC AGGCGGGTGA GGTCATGATC ACGCGGTCCC GCCTGGAAGC CGAACTCGGC
CAGTTGCGCG GTTCGCTGAA TGACATGAGC GGGAACTTGA ACCGCTTGCG CCAGCAACTG
CGCGATATTG AATTGCAGGC TGAAACGCAG ATGCAGTCGC GCCTGGCGCA GGCCAAGGAG
GCTCAGGCCG GGTTCGATCC GCTCGAGTTT GACCGGTTCA CCCGCGTGCA GGAGTTGACG
CGCATGATGG CCGAGTCGGT CAACGACGTG GCGACCGTGC AGCGTACCCT GCAGCGCACC
GTTGAAGCGA CCGAGGATGA CCTGATTGCC CAGGCCCGCC AGACCCGCGA ATTGCAGCGC
GACCTGCTGC GCACGCGCAT GGTGGAGTTT GAGGGGATTT CCGAGCGTCT TTACCGCGTG
GTGCGGCAAG CGTCCAAGGA AGCCGGCAAG CAGGTGAGGC TGGACCTGCT GGGCGGCACC
ATCGAGATGG ACCGTGGCAT GCTGGACCGC ATGACACCCG CGTTCGAGCA TTTGCTGCGC
AACTGCGTGG TACACGGTAT TGAAAACCCG CAGGTACGTG CCGAGGCCGG CAAAGACCCT
GTGGGCCTCA TTACCGTTCA TCTGCGCCAT GAAGGCAACG ACGTTTCGGT GGACTTCAGC
GATGACGGCG GGGGCTTGAA TCTGCAGCGC ATCCGCGAGA AGGCCGTGAG CCTCGGGCTG
GTGACGCCAG AGCAATCCCT GGATGACCAG GAAGCCGCCA ACCTGATTTT CACGGCTGGT
TTTTCGACGG CCGCGCAGGT GACCGAACTG GCCGGACGTG GCATCGGCAT GGATGTGGTT
CGCGCCGAGG TGAATGCACT GGGCGGCCGG ATTGAAACCT CTACTGTCTC CGGCAAGGGG
ACACACTTCA AACTGGTGCT GCCGCTGACT ACTGCGGTGA CCCAGGTGGT GATGATTCGC
GCCGGCAAAC AGGCGGTGGG GGTGCCCGCG AATGTGGTGG AGACCGTGCG CCGCGCTTCG
GCCAAGGAAT TGCAGCAGGC GTATAACAGC GGCACGCTGG AGGTCGCTGG CGAGGCCGTT
CCTTTCTTCT GGTCGGGCGC ATTGCTGCAA GCCTCGCCCC ACAGCAGCGA GACCCAGGGC
AAGACTACAC CGGTGGTCAT TTTCCGAAGT GCGGCCCAGC GCATGGCCTT GCATGTCGAT
GAAGTGCTGG GCAACCGGGA GGTCGTGGTG AAAAACCTGG GGCCGCAGTT GTCACGCCTG
CCGGGTTTGG CTGGCATGTC TGTGCTCGCT TCGGGAGCCG TCGTGCTGAT CTATAACCCG
GTGGCGCTGG CTTCTGTGTA TGGCCAGCAG GCGCGAGCCT GGAGCACGGA CCGGGCGGAG
CCACACATGC TTGAGGAGCT GGGCAATGGT GCCGACAAGG CGGCTGCACT GCTGCCTGCC
GCGCCGCAAA TTCCCCTGAT CCTGGTGGTT GATGACTCGA TTACCGTGCG GCGCGTCACG
CAGCGCCTGT TGCAGCGCGA AGGCTACCGG GTGGCCATGG CGGCCGACGG CCTGCAGGCC
CTCGAACGGT TGCAGGAAGA GCGGCCTGCG GTGGTCCTGT CGGATATTGA GATGCCACGC
ATGGATGGGT TTGACCTGGC GCGCAACATC CGCGGGGATG TCCGCCTCAA CAGCCTGCCC
ATCATCATGA TCACTTCACG GATTGCCGAG AAGCATCGGG AGCATGCCAA GGAGCTGGGG
GTGGACCACT ACCTGGGCAA ACCTTATTCG GAAGAAGAGT TGATGAGCCT GGTGCGCCAT
TACTGCGCAG CAGACATCCC GGCGTCTGCA TAA
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| Protein sequence | MQSNVPNSKT AESDLAVNDL GPLAWVLDEL RKSLEGAAKA LKRFVRDAEA ARGSDLAAID
ASQLRIARQQ LHQAVGALEM VGLPGPALVL RAMEAAVQKF VQQPEQCSQD AAAKIERASF
ALTEYLEGVL ADKPVSAVSL FPQYREVQEL VRADRIHPAD LWPFEWRWLE PELAETAEPR
NYDSGARALL DQSVLQLMKG RAPEAARNLK DLSLGFSARQ ADRQPRIFWK IAAAYFEAVE
HDLLATDLYV RRAASRILLQ YASLGKGDAA ISDRLAQDLL FFCAQAVSTR AGDTPVLSAV
RSMYGLNRFK PVDYELVQFG RFDPALLAQA RKRITSAKEA WSSLSAGDVS KLKSVGEQFS
LVSDSLLKLH PPSAPFAQTL TRAIETTTRS AKPPGIELAM EVATSVLYLE AAFDDLDPND
PQLAVRTTNL AERLEGVRAG GESQPMESWM EELYRRVSDK QTMGSVVGEL RGSLGELEKA
LDVFFRNPQD RTALQAVPGQ LSQMRGVLSV LGLDQASHAV SRMKETVEQM LVTEIDEQLA
RTAGTFDHLG NNLGALSFLI DMLNYQPVLA KKLFVYDDEK GELKPLMGRT QSPPSAASTV
TVNSDLLSRE LISVVEEAGV GASDENLTGR LDALATHAAL AEQPALAQSA REAAKAVSAN
NADAAAVALT SLASSVMQAP AAPAGPLASA DFEEDDLRDI FLEEAREVVG NGQEALLALA
SDSGDVAQLT VLRRAFHTLK GSSRMVGLNE FGEAAWSLEQ MLNSWLADQK TATDEFKSLA
TEAMTGFAKW IEDIAANEDA AWSASAFRSS ADAMRTAGHY APLNLFAPAE VPSSAVTVDD
TAMAGTLELL ELQLESGVPD LAGTGAPADA AVVESPFEFN LDFDDAMDAA APVTASAMDI
EGIDFDSLSA LSAGSGAPAD STAHPVEDEF LSVSLEPESG QAVELSVEDF DKHFHLDTVD
AVEVVEILTP DQAMPAGFEF PSAELVATLP EAVDAAGIFE ALEPAPSQFD ELPDAQEIAA
FEDSLSGLLQ VDGNSDEQVK VIGALRIGIP LYNVYLNEAD EWSRRLVMEV AEWVIERNQP
VSDSTVALAH SLAGSSATVG FHALSEMARA LEHALQQSQA HHRNGAAKYG QVFVDAAEDI
RRLLHQFAAG FLKEADSGVL ERLRQLDFFD SVLPPAGEFS ELEFPPEAPP AEEVGIEPAQ
PLEAEIPEAT LAAASAPDAP PPAPAAVIAT PVRLVPSAPG LVTAATRASI AAAASAWRDE
EAEDDIDAID AIDPDLFPIF EEEGAELMPQ LGGALRQWAA RPDNQGARME VLRALHTLKG
SARLAGALRL GEMAHRIESE IEHLGSDAAA TQEFEPLLTR FDAMQATFED LRRADAAAAA
VPLPPLAAVE APAEAAAPVA STIAQEARQP LAKEPAVAGT STSASAGRKL AIPAPQAMAM
QPLRQAATAS IRVRSQLLDR MVTQAGEVMI TRSRLEAELG QLRGSLNDMS GNLNRLRQQL
RDIELQAETQ MQSRLAQAKE AQAGFDPLEF DRFTRVQELT RMMAESVNDV ATVQRTLQRT
VEATEDDLIA QARQTRELQR DLLRTRMVEF EGISERLYRV VRQASKEAGK QVRLDLLGGT
IEMDRGMLDR MTPAFEHLLR NCVVHGIENP QVRAEAGKDP VGLITVHLRH EGNDVSVDFS
DDGGGLNLQR IREKAVSLGL VTPEQSLDDQ EAANLIFTAG FSTAAQVTEL AGRGIGMDVV
RAEVNALGGR IETSTVSGKG THFKLVLPLT TAVTQVVMIR AGKQAVGVPA NVVETVRRAS
AKELQQAYNS GTLEVAGEAV PFFWSGALLQ ASPHSSETQG KTTPVVIFRS AAQRMALHVD
EVLGNREVVV KNLGPQLSRL PGLAGMSVLA SGAVVLIYNP VALASVYGQQ ARAWSTDRAE
PHMLEELGNG ADKAAALLPA APQIPLILVV DDSITVRRVT QRLLQREGYR VAMAADGLQA
LERLQEERPA VVLSDIEMPR MDGFDLARNI RGDVRLNSLP IIMITSRIAE KHREHAKELG
VDHYLGKPYS EEELMSLVRH YCAADIPASA
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