Gene Slin_2666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2666 
Symbol 
ID8726414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3228542 
End bp3229297 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content37% 
IMG OID 
Producttwo component transcriptional regulator, AraC family 
Protein accessionYP_003387481 
Protein GI284037551 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.21287 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.224489 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAAACA TACTTTTGAT TGAGGATGAT CTTTCGCTTC AATTGACACT CAAAACTATA 
CTCGAACTGT ATGGTCATAG AATAGCCGTG GCTGATAATG GAAAACGTGC GCTTAGCTTA
TTGCGTTATT CCACCCCGGA TTTGATAATT TCTGACATCA TAATGCCGAG AATGGACGGG
TACACATTTC TTGAGAGATT AAAGGAGGGT TTGCCTTACA AAAAAATTCC TGTCATTTTC
TTAACATCAA AAGACTCACA GGAGGATCGT TCAAAGGGCT TAGAGATGGG AGTGATAAGC
TACTTGACAA AGCCAGTAGC CAAAGACGAA ATTATAAGTC AGATCAATAA CCTGATAGCC
TACAGAAATT CAATTATCAA TCGTACCATA TACGAAGCTC ATGAGGACCA ACAACCGGAT
TTTCAGTTTG TAAAGCAATT TTATGATTTA TTAACTGATA TGGCAGTTAA TTCAGATTTC
AGCATTGAAA AAGCGGCCCT GAATTTATTC ATGAGTACAT CTACATTGAA ACGTAGGTTA
AAAAACTATC TTGATTCGAA CTTCAGCGAT CTTGTAAAAG AGTTTAGACT AAAAAAAGCT
GATAATCTCT TGCTGAACAG CGATTATTCA CTAGAGCAAA TTTCAGTGCT ATGTGGCTTT
AGTAGCTTGT CGTACTTCTC AAGAAGTTTC AAGGCGTCCT ATAAGATTAA TCCTAATCAG
TATAGGCATA GAAGGGATAT AGGTCAATCT AACTAG
 
Protein sequence
MANILLIEDD LSLQLTLKTI LELYGHRIAV ADNGKRALSL LRYSTPDLII SDIIMPRMDG 
YTFLERLKEG LPYKKIPVIF LTSKDSQEDR SKGLEMGVIS YLTKPVAKDE IISQINNLIA
YRNSIINRTI YEAHEDQQPD FQFVKQFYDL LTDMAVNSDF SIEKAALNLF MSTSTLKRRL
KNYLDSNFSD LVKEFRLKKA DNLLLNSDYS LEQISVLCGF SSLSYFSRSF KASYKINPNQ
YRHRRDIGQS N