Gene Cagg_3265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3265 
Symbol 
ID7267412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3956878 
End bp3957615 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content51% 
IMG OID643568086 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002464559 
Protein GI219850126 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.45002 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACACAA CCGAAGAAAC CGTACACCTG ATCAACGAGG GGCGCGAGTT GCATGTCGTG 
GTCATCGAAG ATGAGTTGAC GATTGCCGAG TCGTTACGAG TTGGCCTTAC CTATGAGGGT
ATGCGGGTAA CAGTTGCTTC TGAAGGGCGG AGTGCTCTTC AAATCGTTGA AGAGCAGGGA
GCCGATCTTG TTATTCTCGA TTTAATGTTA CCTGACATTG ATGGCATGGT TGTTTGTCGG
CGGTTGCGTG CATGGTCGGA GAAATTGCCT ATCATCATCC TGACTGCGCG CGGTGAAGTG
CAAGAACGGG TGAAAGGCTT GCAATTGGGA GCCGACGATT ACATTGTCAA ACCGTTCAGT
TTCGATGAAT TACTGGCGCG GGTGAATGCT ATTTTTCGAC GGGCGGGCAT CTCACGTCCG
GTAACGGTAC TGCAGGTAGC CGGACTGAGC CTTAATCTGG AGACGCGCGA AGTAACGCTG
CATGGTCGCG CTATCGAATT GACGCCGACC GAGTTTGCAT TACTCGAACA ATTTATGCGT
CATCCACGAC GTGTTTTCAC CCGCCAGACC TTACTGAGTC GGGTGTGGGG GTTTACTTAC
GTCGGTGATT CGAACATCGT CGAAGTTCAT ATCAGCAATC TTCGCGAGAA AATTGGAGAT
CATGAGCGGA AACTCATTCG CACCGTCTAC GGTGTCGGTT ATACCTTGCG ACCCGACGAT
GAAACAATGG TGGCATAA
 
Protein sequence
MNTTEETVHL INEGRELHVV VIEDELTIAE SLRVGLTYEG MRVTVASEGR SALQIVEEQG 
ADLVILDLML PDIDGMVVCR RLRAWSEKLP IIILTARGEV QERVKGLQLG ADDYIVKPFS
FDELLARVNA IFRRAGISRP VTVLQVAGLS LNLETREVTL HGRAIELTPT EFALLEQFMR
HPRRVFTRQT LLSRVWGFTY VGDSNIVEVH ISNLREKIGD HERKLIRTVY GVGYTLRPDD
ETMVA