| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1781 |
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| Symbol | spo0A |
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| ID | 4205215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1979783 |
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| End bp | 1980613 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642566331 |
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| Product | Spo0A protein |
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| Protein accession | YP_699096 |
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| Protein GI | 110801622 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR02875] sporulation transcription factor Spo0A |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGGAAT CAAAAATATC TGTATTAATT GCTGATGATA ACAAAGAGTT TTGCAATATT
TTAAATGACT ATTTATTAAG TCAAAGGGAT ATTGTTGTTA CAGGAATTGC AAAAGATGGA
TTGGAAGCTT TAAAACTTAT AGAAGAAAAA CAACCAGATT TAGTTGTATT AGATATAATT
ATGCCACATT TAGATGGATT AGGTGTACTT GAAAGAATAA ATTCTCTAGG ATTAGAAAAA
ACTCCAAGAG TAATAGTATT ATCTGCTGTT GGACAAGACA AAATTACTCA AAGAGCTATA
ACTTTAGGGG CAGATTATTA TGTTGTTAAA CCATTTGACA TGGATGTATT TACAGAGAGA
ATAAGACAAA TGTTTAATAG CACAATATCA GAGGAACCTA CAAATAGTAA ACCTAAAATT
AGTGTAGTTG AAGGTTCAAA AAGTGAGGAT TCATTTTCTG AGGATAACAA AGAGCCTATG
GATTTAGAGG TTGAAATAAC TAGTATAATT CATGAAATAG GAGTACCAGC TCACATAAAA
GGATATATGT ATTTAAGAGA AGCTATAACT ATGGTTGTAA ATGATATGGA ATTATTATCA
GCTATAACAA AAGAGTTATA TCCTTCAATA GCAAAGAAAT ATAATACTAC TGCAAGTAGA
GTTGAAAGGG CTATAAGACA TGCTATAGAG GTTGCTTGGG GAAGAGGACA AATAGAGGCT
ATAAACAAAA TATTTGGACA TACTATCCAC AATGATAAAG GTAAACCAAC AAACTCAGAG
TTTATAGCTA TGGTTGCAGA TAAATTAAGA CTAAAGAATA AAGTTAGCTA A
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| Protein sequence | MKESKISVLI ADDNKEFCNI LNDYLLSQRD IVVTGIAKDG LEALKLIEEK QPDLVVLDII
MPHLDGLGVL ERINSLGLEK TPRVIVLSAV GQDKITQRAI TLGADYYVVK PFDMDVFTER
IRQMFNSTIS EEPTNSKPKI SVVEGSKSED SFSEDNKEPM DLEVEITSII HEIGVPAHIK
GYMYLREAIT MVVNDMELLS AITKELYPSI AKKYNTTASR VERAIRHAIE VAWGRGQIEA
INKIFGHTIH NDKGKPTNSE FIAMVADKLR LKNKVS
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