Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0616 |
Symbol | |
ID | 6287120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 652126 |
End bp | 658155 |
Gene Length | 6030 bp |
Protein Length | 2009 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642624177 |
Product | CheA signal transduction histidine kinase |
Protein accession | YP_001898199 |
Protein GI | 187927712 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCATC AATCTTCCGC CCAGCCCGAA TCCGCCTCTG TCGAGGCGGT GGGAGCCCCA GCCGGGCGTC AGAAATCCGG CCCCAAGCCT GCCGTGCCCG CGCGTGATCT CTCCGCGCTG GCGTGGGTCG CGCCCAACAT GCGCGCTGCG CTGGACGATG CCGTGCGCGA GTTCGGCGAA TACGCGGCCG ATGTCATCGC CGATCCGGAG GTCATCGGTG CGCGCGATAC GACGTCGCTG CGCCTAGCCG GCCAGTATCT GCACCAGGCT GCCGGCGCGC TGCTGATCGT GGGTCTGCGC GGTGTCGACG TGTATTGCCA AGCCGCCAAG CGCCTGCTCG AGGCGGTGGA TGCCGGCAGC GTCGCCGCCG ACGCCCAAAC GCTGGACGTG TTCTCGCGCG CCGTGCAGGC GTTGCAGGAA TACGTTTCCG ACCTCATGGC TGGCATGGCC GAAGAGCCGC TGCGCCTGTT CCAGCCGTAT CAAGCCGTGC TGTCCCGCCT GGGCGAAGAG CGCATCCACC CGGCTGACCT GTGGGCCGAT GAGCTGCGCC ACCTGCCGGC GCTGCTGCTG CCCTCGCGCG ATTTGCCGGG GCTGGCGCGC CTGCGCCGCA AGTTCGAATT GGCGTTGCTG ACCGCGCTGC GTGCGCCTGC CTCGAACGCC GATGGTGCGG TGGTGGATCC GTCGGCCGCG GCAGCGGCCT ACGCGCCGCT GGAAGACCTG CTGCATGGCA TCCGTGCGCT GGAGCGCGAA CCGCGCCGCG CCGGGGACGA TCTGCAGCGC GATCTGTGGC TCGTGCTGGC CCTGACATTT GGCGCCCTGC GTGCGGGCCT GGTGCCGGCC GACATGACCG CCAAGCGCCT GGCCGCACGC GTCAACCTGC TGCTGCGCCA GTACTCGCAC AACAACGTCC ACTTGCCGCA AGGCCTGCTG ACCGACGCGC TGTATTTGCT GGCCGGCATG GCGTACAGCA ACGCACCGGC AGTGCCGGTT GGCGACGACA CGCTTGGCCC GGATATCGTG GCCTGCGTGC AGGCCTTCGC GATTCCGCCC ACGCACGCGC CCGCTGGCGC ACTGCACACG CGTCAGTACT ACGCACTGCT GCCGACCGAC GCCAGCGACA CGCTGCAACG CGTCGGCCGC TCGCTCGAAA CGCTCAGTCA ACAACCTGCA CCCGCGGCGG ACGAACTCGA TGCTGCACTG CAGACCCTTG CGCTGCATGC CGATGCGCTG GGGCAGCCGG CCCTGTCCGA CCTGTCGAAC CGTCTGACCG AAGCTGCCGG GCAGGACGTT GCGCCCACGC TGCAATTCCT CTCGCGCATG CTGGCCCGCC CGTGGGCGGT GCATGGCGAA TCCGGCGACT TGCGCAGCGC GTGGTTTGCC GCCCGCTGCA GCGAACTGGC CGAACACGCC CGCGCGACGC AAGACGGTCA CGCCGTGCCG GCTCCCGCAT GGCTCACGCT CCTGGCCGAA GAAGCTGCAC AACGCCGCGC GCATGCCGAG CAGGTTCGCG CGCTGCAAAC GTTGCTGGCC TCTGCCGAAA CGCACCTCGA TGCGTTCGAG CGCGAAGGCG TGGAAAGCGG CGGCCTGCAG GAAGCCGCCC GCCTGTTCGG CGAGATGCAA ACTGCCTTTG CCGCGCTCGA CGCCTATGAG GCAGTGCACG CCACCGAAGC TGCCCAATCG ACCATCAACG CGCTGCAAGC CGCGGGCGAG GGCGCAACTG CCGATCGTGA GCGCTACCTG GCTGCGCTGG CTGCCAACGT CAGCGGTCTG CAGGCCTTGC TTGATGCGTT GTCTGCCGGC ACAGAACTGG CCGGCGGCCA AGTCGACGAG ATCGTCATTG AAGGCCAGCT GACGCCCACC GAGCGCGAAA CCGCATGGCG CGAGTTCGCC TTCGATACCG AATCCGGCAT GCTGGCCCGC CGCGAGCCGC AATCCGAAAC GCTCGTCGGC GCAGACATCG CCAATGCCGA TGCCGCGTCG CCGCTGCAAT CGTTGCTTGA TCGCCTGCTG GCCAAGCAAC CGGTCGACCC GTCCGACCCG CTGGCTGCGG AGCTGCGCAC TGCGCTGCAG GAAGCGCGCG ATGCCGCCGC CATCGACGAC GATCCGGCTC GCCGACGCCG CCTGGAAGAG GCGCTGGCCC AGTTCGATGC ATGGCAGGTT GGCAGCCCCG GCGCGCTTGA GCGGATGCAG GCCGCATTGG CGGCACCGGT TGCTGCGCCT GCGGCCGCCG CGCCTGCGCC AACTGCCGCA CGGGATACCC AATCCATCGA CGCCGAGCTG CTCGACATCT TCCTGTCTGA AGCCGAAGAA GTGCTGGCCG GCGTGCGCGC CGACCTGCAG GGTCTGCAGG CCGCTGCCGA CATGGGCACG GGCGGTCTGG CTGCCGGTTC GGACCTGGAC TTGCTTACGC AGTTGCGCCG CGCGTTCCAC ACGCTCAAGG GCTCGGGCCG CATGGTCGGG CTCACGCGCT ATGGCGAGGC GGCCTGGGCC ATCGAGCAGG TGATGAATGT CTGGCTGGCC GAGAACCGTG TGCCGACGCA TGACCTGGCC GCGCTCCTGA CGCGCGCCGA GTCCGAGTTG TCAACGTGGG CCGCTGCCAT CGCGCAATCG CCCCAAGCCG ATCACGCGAT TGAACCGCTG GTCGCCGCCG CAGAGCGCGT GCGCCATGGT GGTCCGTTCG TGTGGCTGGA GGCCGTGCCC GAAACGCAGG CCGCTCCCGA ACACGCTGAG CCGCAAGTGC CCGAAGCACC GGCTGCGGAA CCCGCATTGC ACGACATCGA CGCGATGCAG CCGATGGAGT TGACTGCACC GGATGTGCCC GTTGCAGAAG CCGAAGAAGC CGTCGCGCTC CAGTGGGAAG ACGAACCTGC GCTGCCCGAC GTCGAGGCGC CGATGCCCGA GGCGACCGCA CCGCTGGTCG AGCATGAGGC AGTCGAGCCG GCTGCAGAGC ACGTCGAAGA GACGATTCAG GACGCTGCCG CTGAACCGGT TGCCGCCGAT GCCGACGCCA AGGTGATCCC GTTCCCGTTC GCGCAGACCG GCGAGCTGGA GGAAGCACCG CACGACGACG GCGTGAAGGA GATTGGTCCG GTCCGCATCA GCGTGGCGCT GTACAACGTC TACCTGCAGG AAGCCGATGA TCTGATCCGC CGGCTCGGCG TGGATTTCTC GGAGTGGCGC CACGAAGGCC GCACGCCGCC GAGCGAGCTG GCCCTGCGCG CCGCGCACAC GCTGCAAGGC AGTTCCGCCG TGGTTGAGCT GGAGCCCGTG CGCCAGTTGG CTGGGGCGCT GGAGCAGGTG CTGCTGAATC TGAACAGTCG CCCGGTGGCG ATGCATCCGG GCGACTTCCG CCTGCTCGAT CAATCCATCG AGCGCATGCG CGGCATGCTG CATCAATTTG CCGCCAGCCT CTGGCCCGAC GCCGACGAGC CACTGCGCCG CAGCCTGGAC GAGCTGTGCG AGCGCCTGCT CGTGCGTCCG CGCCTGCCGC TGGAGCCGGC GCCCACTGCC TTTACCGAAG CCGAACAGGC CGAGAACGAA ACCCCCAGCC AGGCTGGCGA GCCCGAGTTT GAGCCGGCAC AGGTTGCGCC GACGTTCGTG CCCGTACACG AGTCGCCCGT TGCCGAGCCG GCCGTCGGTG AGCTGGTTCG CCAGGCACCG GCCGACGCGC TCGACCCGGC GCTGCTGGAA ATCTTCCTGG AGGAAGCGCA CGTCGCGCTG CCTGAACTGG GCCAGCACCT GCGTGCGTGG GAAGCTGCGC CGCAGGATCG CAATGCTGCC GGCCTGCTGC TGCGCAACCT GCACACCGTC AAGGGCAGTG CGCGCATGGC CGGCGCCATG ACGCTAGGTC AGGCTGCGCA CGAAATGGAA AGCGCCATTG AAGGCGGCCT GCGCCAGAAC CGCGTGGATG GCGCACTGTT CCGCAAGCTC TACGTCTGGT TTGACCGCAT CCAGGCGCAC GTCGATGCCC TGGGCGCGGG CAATCTGCTG CCGCTCGATG CCGGCCTAGC CGATGCCGCC GATACGCAGC AGACGGCCGC CGACGCGCAT GCATCGTCCG GCGCATCGAT GCTGCCGGCT GTTGCGGTAT CGACGAACGT CGATCTGACC GGCACGCGCA GCCCGGAAGC CGAAGCCCTG GAAGTGGCCG AACGCCAGCG CGCGATGGTG CGCGTGCAGG CGCGTGCGCT CGATTCGCTC ATCAACGATG CGGGTGAAGT CGGTGCCGCG CGTGCGCGCC TCGAGTCGGA AGTCGATGCG CTCAAGACCT ACCTGTCGGA ACTGAACGAC AACGTAGCGC GTTTGCGCTC GCAGGTGCGC GAGATCGAAA TCCAGGCCGA AACGCAGATG GAGTCGCGCA TTGCCGATGC GGCTGCACAT TCCGAGTCGT TCGACCCCCT GGAGTTCGAC CGATTCACGC GCTTGCAGGA ACTCACGCGG ATGATGGCCG AGTCCGTCAA CGACGTGGCG ACGGTGCAGC AGAACTTGTT CCGCGGTTTC GATCAGGCGT CGCTCGATCT GGAAACCCAG GCACGCCTCA CGCGCGGCCT GCAGCGCAGC CTGATGCGCG CGCGCATGGT GCAGTTCGAT ACCGTGGCAG ACCGTCTGTA TCGCGTGGCC CGCCAGGCCG CGGCGGAAAC CGGCAAGGAA GTCCGTCTGT TCATCAAGGG CGGTACGGTG GAACTGGATC GCAGCGTCCT GGACCGCATG GGCGGGCCGC TGGAACACAT GATCCGCAGC GCCGTCGCAC ACGGCATTGA GTCGGCCGAC GAGCGCCGCG CCAAGGGCAA GAATCCGGCT GGCGAGCTCA CGCTCGAGGT GCAGCAGGAA GGCAACGAAG TCGTGCTGCA CTTCGTTGAC GACGGTGCCG GCCTGAACCT CGACCGCATT CGCGCACGCG CGCTGGAGCG TCAACTGCTG GCCGCTGACG AAGAAGCCAG CGACGCGCGC CTCACCGAGA TGATCTTCAC GCCGGGCTTC TCCACTGCCG ATCAGGTGTC GGAGCTGGCC GGTCGTGGCG TGGGCATGGA CGTGGTGCGT GCCGAAACCG TCGCCCTGGG TGGCCGGATC TCGCTGCAGA CCACGCCCGA AGTCGGCACG CGTTTCACCA TCCACCTGCC GCTGACGACT GCGATCACGC AGGTGCTGTT GGTGCGCGTG AACGAGCGTG TTTACGCGAT TCCGTCGGGC ATGATCGACC ACGTACAGCA ACTGCGCCCG CAGGCGCTGG CCGAGGCGTA TAACGCCGCC GCGCTGCAAT TGCCGACCGG CCCCGTGCCG TTCCACTACT TTGGCGCGCT GCTCGAAGAA GCGACATCCG TCACGGGCGC GCGCAAGTAC TCGCCGGCGG TGGTCGTGCG CAACGGTGCC GAGCGCGCCG CCGTGCACGT CGACGAAGTG ATCGGCAACC GCGAAGTGGT GGTCAAACAC ATCGGCCCGC ACCTTGCGCG TCTGGAAGGT ATTGCCGGTG CGACCACGCT GGGCGACGGC GAGATCGTGC TGATCTACAA CCCCGTGGTG CTCACGCAGC GCTTCGAGCG CGAAGCCGCC GCACGTGGCC CATCCGATCA GGAAGCGACG GGCGCCGTGG CCGAGCTGCA CCGCGACGGC AGCATCGACG CCGTGCCGGG CCTGGCCACA CAGCCAATCG TGATGGTGGT CGACGATTCG CTCACGGTGC GCAAGGTCAC GCAGCGTCTG CTCACGCGGT CCGGCTACCA GGCCGTGCTC GCGCGCGACG GCGTGGACGC GCTGCGTCAG CTTCAGGAAG TCACGCCCGA CGCGATGCTC GTTGACATCG AAATGCCGCA CATGGACGGG TTCGACCTCA CGCGCAACGT GCGTGCGGAT GAGCGCATCG GCGCCACGCC GATCATCATG ATCACCTCGC GTACGGCCGA CAAGCACCGC CGTTACGCGG CTGAGATCGG CGTGAACGTC TACCTGGGCA AGCCGTACAA CGAAGAGGAG TTGCTCCAGC ATCTGCGCAA CCTCATCGGC GAGCGCGCGC CGGCGGCCAG GGCAGGCTGA
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Protein sequence | MRHQSSAQPE SASVEAVGAP AGRQKSGPKP AVPARDLSAL AWVAPNMRAA LDDAVREFGE YAADVIADPE VIGARDTTSL RLAGQYLHQA AGALLIVGLR GVDVYCQAAK RLLEAVDAGS VAADAQTLDV FSRAVQALQE YVSDLMAGMA EEPLRLFQPY QAVLSRLGEE RIHPADLWAD ELRHLPALLL PSRDLPGLAR LRRKFELALL TALRAPASNA DGAVVDPSAA AAAYAPLEDL LHGIRALERE PRRAGDDLQR DLWLVLALTF GALRAGLVPA DMTAKRLAAR VNLLLRQYSH NNVHLPQGLL TDALYLLAGM AYSNAPAVPV GDDTLGPDIV ACVQAFAIPP THAPAGALHT RQYYALLPTD ASDTLQRVGR SLETLSQQPA PAADELDAAL QTLALHADAL GQPALSDLSN RLTEAAGQDV APTLQFLSRM LARPWAVHGE SGDLRSAWFA ARCSELAEHA RATQDGHAVP APAWLTLLAE EAAQRRAHAE QVRALQTLLA SAETHLDAFE REGVESGGLQ EAARLFGEMQ TAFAALDAYE AVHATEAAQS TINALQAAGE GATADRERYL AALAANVSGL QALLDALSAG TELAGGQVDE IVIEGQLTPT ERETAWREFA FDTESGMLAR REPQSETLVG ADIANADAAS PLQSLLDRLL AKQPVDPSDP LAAELRTALQ EARDAAAIDD DPARRRRLEE ALAQFDAWQV GSPGALERMQ AALAAPVAAP AAAAPAPTAA RDTQSIDAEL LDIFLSEAEE VLAGVRADLQ GLQAAADMGT GGLAAGSDLD LLTQLRRAFH TLKGSGRMVG LTRYGEAAWA IEQVMNVWLA ENRVPTHDLA ALLTRAESEL STWAAAIAQS PQADHAIEPL VAAAERVRHG GPFVWLEAVP ETQAAPEHAE PQVPEAPAAE PALHDIDAMQ PMELTAPDVP VAEAEEAVAL QWEDEPALPD VEAPMPEATA PLVEHEAVEP AAEHVEETIQ DAAAEPVAAD ADAKVIPFPF AQTGELEEAP HDDGVKEIGP VRISVALYNV YLQEADDLIR RLGVDFSEWR HEGRTPPSEL ALRAAHTLQG SSAVVELEPV RQLAGALEQV LLNLNSRPVA MHPGDFRLLD QSIERMRGML HQFAASLWPD ADEPLRRSLD ELCERLLVRP RLPLEPAPTA FTEAEQAENE TPSQAGEPEF EPAQVAPTFV PVHESPVAEP AVGELVRQAP ADALDPALLE IFLEEAHVAL PELGQHLRAW EAAPQDRNAA GLLLRNLHTV KGSARMAGAM TLGQAAHEME SAIEGGLRQN RVDGALFRKL YVWFDRIQAH VDALGAGNLL PLDAGLADAA DTQQTAADAH ASSGASMLPA VAVSTNVDLT GTRSPEAEAL EVAERQRAMV RVQARALDSL INDAGEVGAA RARLESEVDA LKTYLSELND NVARLRSQVR EIEIQAETQM ESRIADAAAH SESFDPLEFD RFTRLQELTR MMAESVNDVA TVQQNLFRGF DQASLDLETQ ARLTRGLQRS LMRARMVQFD TVADRLYRVA RQAAAETGKE VRLFIKGGTV ELDRSVLDRM GGPLEHMIRS AVAHGIESAD ERRAKGKNPA GELTLEVQQE GNEVVLHFVD DGAGLNLDRI RARALERQLL AADEEASDAR LTEMIFTPGF STADQVSELA GRGVGMDVVR AETVALGGRI SLQTTPEVGT RFTIHLPLTT AITQVLLVRV NERVYAIPSG MIDHVQQLRP QALAEAYNAA ALQLPTGPVP FHYFGALLEE ATSVTGARKY SPAVVVRNGA ERAAVHVDEV IGNREVVVKH IGPHLARLEG IAGATTLGDG EIVLIYNPVV LTQRFEREAA ARGPSDQEAT GAVAELHRDG SIDAVPGLAT QPIVMVVDDS LTVRKVTQRL LTRSGYQAVL ARDGVDALRQ LQEVTPDAML VDIEMPHMDG FDLTRNVRAD ERIGATPIIM ITSRTADKHR RYAAEIGVNV YLGKPYNEEE LLQHLRNLIG ERAPAARAG
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