| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2074 |
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| Symbol | |
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| ID | 4257239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2445465 |
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| End bp | 2446145 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638122742 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_738119 |
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| Protein GI | 114047569 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00164535 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00140528 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTAGAA TACTGTTAGT CGATGATGAT CCTTTATTCA GAGTTTGGTT AACTGATGCG
CTGAAAACAC AGGGACATGA GGTTGAATGT GCCATAAATG GCATTGAAGG GCTGAAACGG
ATCCGCAGCT TTATGCCCGA CATTATCATG CTCGATCTGA TCATGCCGCA GATGGATGGT
TTTTCGCTTT TAGAGGCGAG GGACTGTATG ACACCGATCA TGATGCTTTC TGCCCGTGAC
AATGAGGAAG ATAGGATCAG ATGTTATGAG CTTGGCGCGG ATGATTTTTT GACGAAACCC
TTTAGCATTA AAGAGTTATT AGTCCGTTTG CATGCCTTAG AGCGGCGATT GATATCACGC
CCACCAGAGC AAATGGCCAT AGAGCAGGCA ACAATTCAGC CTGTCAAATT CGATGAAACG
GCCTATAGGA TCACTATCGG AAAAAATGCC GTAGAACTCA CGCAAACCGA GTTTAGGCTG
TTTAAATACC TGTTTGAGCG TAAAGGGCAA GTGATCACTA AGCAGGAATT GCAAAAATCG
GTGTTGCAGA AGGACTTAGG CCGATTCGAC CGCAATTTAG ATATGCATAT CAGTAACACG
CGGCGCAAAC TGGCAAATAC CCGTTTACCG CGGACATTAA TCAACACTGT CCGTGGTCAA
GGATACAGTT TTTCTGCTTG A
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| Protein sequence | MSRILLVDDD PLFRVWLTDA LKTQGHEVEC AINGIEGLKR IRSFMPDIIM LDLIMPQMDG
FSLLEARDCM TPIMMLSARD NEEDRIRCYE LGADDFLTKP FSIKELLVRL HALERRLISR
PPEQMAIEQA TIQPVKFDET AYRITIGKNA VELTQTEFRL FKYLFERKGQ VITKQELQKS
VLQKDLGRFD RNLDMHISNT RRKLANTRLP RTLINTVRGQ GYSFSA
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