| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2692 |
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| Symbol | |
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| ID | 8133645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3055452 |
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| End bp | 3056141 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644865980 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_003018258 |
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| Protein GI | 253689068 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAGAAA AACGGGTGTT AATTATTGAA GACGACATGG ACGCCGCCAG CGTGCTCGAA
GCTTATCTGC GACGCGATGG CTATCAGGTT TCTATCGCGT CTGATGGACA AAAAGGTCTG
CACATGGCGC TGACCAGTAA ACCCGATTTG ATTTTGCTGG ATGTGATGTT GCCGAAGATG
AATGGCTCTG AGGTGCTGTC CGCCCTGCGT CAGCGCAGTA ATATTCCGGT GATTATGGTC
ACCGCCATCG GCGACGAGCC GGAAAGAATT GGCGCACTGC GCTACGGTGC GGATGATTAT
GTCGTCAAGC CTTACAACCC GCAGGAAGTG GTGGCGCGCG TGCAGGCCGT GCTTCGGCGC
ACCGGCTACG CCATTCGGGA AGAGGCGATC CTGACATTCG AAAATTTATC CGTTGACCCG
AGCTCCGTGA CAGCAAGCAT CGCGCTATCA CCATCCGAAT CCGTGGTTCT CGACCTGACC
CCCACTGAAT TCAATATTCT GGTGACGCTG CTCAAAGCGC CAAACCGCGC CTTTACACGG
GGCGAATTAC TGGAAGCCAG CCTGCCGGAA AGCGACGCGC TGGAACGTGT GGTGGATACT
CACGTCCACA ATCTCAGGAA GAAGCTCAAC CAGCACAACA TCATCAATGT GCTTGTCACT
GTCCGTTCTG TCGGCTACCG ATTCCGGTGA
|
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| Protein sequence | MAEKRVLIIE DDMDAASVLE AYLRRDGYQV SIASDGQKGL HMALTSKPDL ILLDVMLPKM
NGSEVLSALR QRSNIPVIMV TAIGDEPERI GALRYGADDY VVKPYNPQEV VARVQAVLRR
TGYAIREEAI LTFENLSVDP SSVTASIALS PSESVVLDLT PTEFNILVTL LKAPNRAFTR
GELLEASLPE SDALERVVDT HVHNLRKKLN QHNIINVLVT VRSVGYRFR
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