Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_3017 |
Symbol | |
ID | 4115816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 3024867 |
End bp | 3025544 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 638037787 |
Product | two component transcriptional regulator |
Protein accession | YP_645739 |
Protein GI | 108805802 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTCCGG GCACGCGCAT ACTGGTGGTA GAGGACGACC CCTCCATCGC CCGGCTGCTG CAGCTGGAGC TCGAGCACCG GGGGTACGAG GTCTGCTGCG CCGCGGACGG GGAGGAGGGG CTCGCCGCCT TCGAGCGGCT CCGGCCCGAC GTGGTGGTGC TCGACATCAT GCTCCCGGGG ATGGACGGGG TGGGGGTGCT CAGGCGACTC CGGGAGGCCG GGCACCGGAC CCCGGTGATC ATGCTGACCG CCCGCGACGC CACCGGGGAC AAGGTGCACA GCCTGGACCG CGGCGCCGAC GACTACCTCA CCAAGCCGTT CGAGGTCGAG GAGCTGCTGG CCCGGATGCG GGCGGTGCTG CGGCGGGTGG AGGGGGAGGA GGTGCTGCGG GTGGGGAGCC TCACCGTGGA CACCTCCGCC CGCGAGGTCC GGCGGGGCGG GCGGGCCGTG GCGCTCACGG CCCGCGAGTA CGACCTTCTG GAGCTCCTCG CCCGCAACGG CCGCCGGGTG CTCTCGAGGG AGAAGATCCT GGACCGGGTC TGGGGCGAGG GGGCGGGCGT GGACCCGAAC GTGGTGGACG TGTACGTCGG GTACCTGCGC CGGAAGCTCG AGGGGCCCGG GGAGGGGCGG CTCATCCACA CCGTGCGCGG GGTGGGCTAC GTGCTCAGGG AGGACTAG
|
Protein sequence | MRPGTRILVV EDDPSIARLL QLELEHRGYE VCCAADGEEG LAAFERLRPD VVVLDIMLPG MDGVGVLRRL REAGHRTPVI MLTARDATGD KVHSLDRGAD DYLTKPFEVE ELLARMRAVL RRVEGEEVLR VGSLTVDTSA REVRRGGRAV ALTAREYDLL ELLARNGRRV LSREKILDRV WGEGAGVDPN VVDVYVGYLR RKLEGPGEGR LIHTVRGVGY VLRED
|
| |