Gene Rxyl_3017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_3017 
Symbol 
ID4115816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp3024867 
End bp3025544 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content74% 
IMG OID638037787 
Producttwo component transcriptional regulator 
Protein accessionYP_645739 
Protein GI108805802 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCCGG GCACGCGCAT ACTGGTGGTA GAGGACGACC CCTCCATCGC CCGGCTGCTG 
CAGCTGGAGC TCGAGCACCG GGGGTACGAG GTCTGCTGCG CCGCGGACGG GGAGGAGGGG
CTCGCCGCCT TCGAGCGGCT CCGGCCCGAC GTGGTGGTGC TCGACATCAT GCTCCCGGGG
ATGGACGGGG TGGGGGTGCT CAGGCGACTC CGGGAGGCCG GGCACCGGAC CCCGGTGATC
ATGCTGACCG CCCGCGACGC CACCGGGGAC AAGGTGCACA GCCTGGACCG CGGCGCCGAC
GACTACCTCA CCAAGCCGTT CGAGGTCGAG GAGCTGCTGG CCCGGATGCG GGCGGTGCTG
CGGCGGGTGG AGGGGGAGGA GGTGCTGCGG GTGGGGAGCC TCACCGTGGA CACCTCCGCC
CGCGAGGTCC GGCGGGGCGG GCGGGCCGTG GCGCTCACGG CCCGCGAGTA CGACCTTCTG
GAGCTCCTCG CCCGCAACGG CCGCCGGGTG CTCTCGAGGG AGAAGATCCT GGACCGGGTC
TGGGGCGAGG GGGCGGGCGT GGACCCGAAC GTGGTGGACG TGTACGTCGG GTACCTGCGC
CGGAAGCTCG AGGGGCCCGG GGAGGGGCGG CTCATCCACA CCGTGCGCGG GGTGGGCTAC
GTGCTCAGGG AGGACTAG
 
Protein sequence
MRPGTRILVV EDDPSIARLL QLELEHRGYE VCCAADGEEG LAAFERLRPD VVVLDIMLPG 
MDGVGVLRRL REAGHRTPVI MLTARDATGD KVHSLDRGAD DYLTKPFEVE ELLARMRAVL
RRVEGEEVLR VGSLTVDTSA REVRRGGRAV ALTAREYDLL ELLARNGRRV LSREKILDRV
WGEGAGVDPN VVDVYVGYLR RKLEGPGEGR LIHTVRGVGY VLRED