More than 300 homologs were found in PanDaTox collection
for query gene Dhaf_4841 on replicon NC_011830
Organism: Desulfitobacterium hafniense DCB-2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011830  Dhaf_4841  response regulator receiver protein  100 
 
 
118 aa  240  3.9999999999999997e-63  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.202718  n/a   
 
 
-
 
NC_009253  Dred_3178  response regulator receiver protein  52.59 
 
 
135 aa  129  1.0000000000000001e-29  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00591737  n/a   
 
 
-
 
NC_010424  Daud_2177  response regulator receiver protein  46.96 
 
 
120 aa  117  6e-26  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1973  response regulator receiver protein  42.61 
 
 
127 aa  114  6e-25  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.00115006  hitchhiker  0.0000141072 
 
 
-
 
NC_008346  Swol_2412  response regulator receiver protein  49.09 
 
 
123 aa  112  1.0000000000000001e-24  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.18168  n/a   
 
 
-
 
NC_009674  Bcer98_3857  response regulator receiver protein  44.74 
 
 
122 aa  110  6e-24  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.161717  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5134  response regulator receiver protein  43.1 
 
 
122 aa  108  2.0000000000000002e-23  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0135031  n/a   
 
 
-
 
NC_013205  Aaci_2784  response regulator receiver protein  45.69 
 
 
125 aa  108  2.0000000000000002e-23  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.0945133  n/a   
 
 
-
 
NC_013216  Dtox_0055  response regulator receiver protein  44.44 
 
 
133 aa  109  2.0000000000000002e-23  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.0166098  hitchhiker  0.000805427 
 
 
-
 
NC_012793  GWCH70_3334  response regulator receiver protein  42.48 
 
 
120 aa  107  6e-23  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5466  stage 0 sporulation protein F  42.24 
 
 
122 aa  106  8.000000000000001e-23  Bacillus cereus ATCC 10987  Bacteria  normal  0.0750811  n/a   
 
 
-
 
NC_005945  BAS5185  stage 0 sporulation protein F  42.24 
 
 
122 aa  106  8.000000000000001e-23  Bacillus anthracis str. Sterne  Bacteria  normal  0.0413406  n/a   
 
 
-
 
NC_005957  BT9727_5020  stage 0 sporulation protein F  42.24 
 
 
122 aa  106  8.000000000000001e-23  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.000000180816  n/a   
 
 
-
 
NC_006274  BCZK5036  stage 0 sporulation protein F  42.24 
 
 
122 aa  106  8.000000000000001e-23  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000000486089  n/a   
 
 
-
 
NC_011658  BCAH187_A5514  sporulation initiation phosphotransferase F  42.24 
 
 
122 aa  106  8.000000000000001e-23  Bacillus cereus AH187  Bacteria  hitchhiker  0.000000170867  n/a   
 
 
-
 
NC_007530  GBAA_5581  stage 0 sporulation protein F  42.24 
 
 
122 aa  106  8.000000000000001e-23  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0132264  n/a   
 
 
-
 
NC_011773  BCAH820_5429  sporulation initiation phosphotransferase F  42.24 
 
 
122 aa  106  8.000000000000001e-23  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  6.26925e-31 
 
 
-
 
NC_011725  BCB4264_A5459  sporulation initiation phosphotransferase F  42.24 
 
 
122 aa  106  8.000000000000001e-23  Bacillus cereus B4264  Bacteria  hitchhiker  0.000856307  n/a   
 
 
-
 
NC_013216  Dtox_3740  response regulator receiver protein  45.05 
 
 
135 aa  104  4e-22  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.119956  normal 
 
 
-
 
NC_013411  GYMC61_3444  response regulator receiver protein  42.86 
 
 
120 aa  104  4e-22  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011772  BCG9842_B5493  sporulation initiation phosphotransferase F  41.38 
 
 
122 aa  104  5e-22  Bacillus cereus G9842  Bacteria  hitchhiker  0.0000162821  unclonable  2.17721e-26 
 
 
-
 
NC_007644  Moth_2406  response regulator receiver domain-containing protein  43.86 
 
 
124 aa  97.8  5e-20  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
CP001509  ECD_02147  fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein  42.61 
 
 
461 aa  95.5  2e-19  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1438  two component, sigma54 specific, transcriptional regulator, Fis family  42.61 
 
 
461 aa  95.5  2e-19  Escherichia coli DH1  Bacteria  normal  0.445705  n/a   
 
 
-
 
NC_010468  EcolC_1430  acetoacetate metabolism regulatory protein AtoC  42.61 
 
 
461 aa  95.5  2e-19  Escherichia coli ATCC 8739  Bacteria  normal  0.324678  hitchhiker  0.00137179 
 
 
-
 
NC_010498  EcSMS35_2369  acetoacetate metabolism regulatory protein AtoC  42.61 
 
 
461 aa  95.5  2e-19  Escherichia coli SMS-3-5  Bacteria  normal  0.0790211  normal 
 
 
-
 
NC_012892  B21_02106  hypothetical protein  42.61 
 
 
461 aa  95.5  2e-19  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A2361  acetoacetate metabolism regulatory protein AtoC  42.61 
 
 
461 aa  95.5  2e-19  Escherichia coli HS  Bacteria  normal  0.18992  n/a   
 
 
-
 
NC_013552  DhcVS_1078  DNA-binding response regulator  38.46 
 
 
180 aa  95.1  3e-19  Dehalococcoides sp. VS  Bacteria  unclonable  0.00000000000063084  n/a   
 
 
-
 
NC_009253  Dred_2891  response regulator receiver protein  43.24 
 
 
135 aa  95.1  3e-19  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00486665  n/a   
 
 
-
 
NC_009455  DehaBAV1_1106  response regulator receiver protein  37.61 
 
 
180 aa  93.6  7e-19  Dehalococcoides sp. BAV1  Bacteria  normal  0.0674112  n/a   
 
 
-
 
NC_013411  GYMC61_1696  two component transcriptional regulator, winged helix family  44.92 
 
 
224 aa  92.8  1e-18  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010524  Lcho_4000  two component Fis family transcriptional regulator  44.55 
 
 
240 aa  91.7  3e-18  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000000203773 
 
 
-
 
NC_002936  DET1294  DNA-binding response regulator  36.75 
 
 
180 aa  91.3  4e-18  Dehalococcoides ethenogenes 195  Bacteria  unclonable  0.00000125664  n/a   
 
 
-
 
NC_009483  Gura_0495  two component, sigma-54 specific, Fis family transcriptional regulator  38.26 
 
 
456 aa  91.3  5e-18  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_0838  two component, sigma54 specific, Fis family transcriptional regulator  43.1 
 
 
457 aa  91.3  5e-18  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2915  sigma-54 dependent DNA-binding response regulator  38.26 
 
 
457 aa  90.9  6e-18  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0555  two component, sigma54 specific, Fis family transcriptional regulator  38.46 
 
 
457 aa  89.4  1e-17  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_1013  two component, sigma54 specific, transcriptional regulator, Fis family  40.57 
 
 
456 aa  89.4  1e-17  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.0616674 
 
 
-
 
NC_010571  Oter_1278  two component, sigma54 specific, Fis family transcriptional regulator  40.17 
 
 
452 aa  88.6  2e-17  Opitutus terrae PB90-1  Bacteria  normal  0.902353  normal 
 
 
-
 
NC_008554  Sfum_2092  two component, sigma54 specific, Fis family transcriptional regulator  36.75 
 
 
462 aa  89.4  2e-17  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.131918 
 
 
-
 
NC_013173  Dbac_0387  response regulator receiver modulated metal dependent phosphohydrolase  40.52 
 
 
487 aa  89  2e-17  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0207452  n/a   
 
 
-
 
NC_013525  Tter_0790  two component, sigma54 specific, transcriptional regulator, Fis family  39.42 
 
 
466 aa  89.4  2e-17  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009718  Fnod_0692  response regulator receiver protein  38.66 
 
 
119 aa  88.6  3e-17  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3098  two component, sigma54 specific, transcriptional regulator, Fis family  38.18 
 
 
491 aa  88.6  3e-17  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007347  Reut_A3402  helix-turn-helix, Fis-type  40.35 
 
 
236 aa  88.2  4e-17  Ralstonia eutropha JMP134  Bacteria  normal  0.0473986  n/a   
 
 
-
 
NC_009051  Memar_0945  response regulator receiver protein  41.53 
 
 
120 aa  87.8  4e-17  Methanoculleus marisnigri JR1  Archaea  normal  0.0428151  n/a   
 
 
-
 
NC_009253  Dred_1312  two component, sigma54 specific, Fis family transcriptional regulator  38.74 
 
 
455 aa  87.4  5e-17  Desulfotomaculum reducens MI-1  Bacteria  normal  0.502008  n/a   
 
 
-
 
NC_007955  Mbur_0359  CheY like protein  40.95 
 
 
120 aa  87.8  5e-17  Methanococcoides burtonii DSM 6242  Archaea  normal  0.0502207  n/a   
 
 
-
 
NC_007519  Dde_3715  multi-sensor signal transduction histidine kinase  38.83 
 
 
653 aa  87.4  6e-17  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_6438  putative two component, sigma54 specific, transcriptional regulator, Fis family  35.9 
 
 
394 aa  87.4  6e-17  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.00615091  normal  0.383003 
 
 
-
 
NC_009943  Dole_0516  two component, sigma54 specific, Fis family transcriptional regulator  39.66 
 
 
468 aa  87  7e-17  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000971097  n/a   
 
 
-
 
NC_008751  Dvul_0092  response regulator receiver protein  40 
 
 
682 aa  87  7e-17  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1320  sigma-54 dependent DNA-binding response regulator  38.46 
 
 
460 aa  86.7  1e-16  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_0252  response regulator receiver protein  38.6 
 
 
239 aa  86.7  1e-16  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.114255 
 
 
-
 
NC_008751  Dvul_2853  two component, sigma54 specific, Fis family transcriptional regulator  41.51 
 
 
476 aa  86.3  1e-16  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_2980  response regulator receiver protein  39.47 
 
 
138 aa  85.5  2e-16  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A0275  putative two component response regulator transcription regulator protein  40.83 
 
 
229 aa  85.5  2e-16  Methylibium petroleiphilum PM1  Bacteria  normal  0.625871  normal  0.0173821 
 
 
-
 
NC_007575  Suden_1556  response regulator receiver domain-containing protein  38.32 
 
 
125 aa  85.5  2e-16  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.848966  n/a   
 
 
-
 
NC_009712  Mboo_1338  response regulator receiver protein  38.98 
 
 
120 aa  85.5  2e-16  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.376219 
 
 
-
 
NC_013202  Hmuk_0237  response regulator receiver protein  37.61 
 
 
119 aa  85.9  2e-16  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.390769  normal  0.929667 
 
 
-
 
NC_007796  Mhun_0108  response regulator receiver domain-containing protein  42.86 
 
 
120 aa  85.5  2e-16  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_009767  Rcas_3604  putative PAS/PAC sensor protein  36.13 
 
 
619 aa  85.9  2e-16  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.562878 
 
 
-
 
NC_013739  Cwoe_5381  two component transcriptional regulator, winged helix family  42.37 
 
 
235 aa  85.9  2e-16  Conexibacter woesei DSM 14684  Bacteria  normal  0.0242785  normal 
 
 
-
 
NC_002936  DET0624  response regulator  38.46 
 
 
334 aa  85.5  3e-16  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_2074  two component Fis family transcriptional regulator  39.5 
 
 
227 aa  85.1  3e-16  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_1858  response regulator receiver protein  38.98 
 
 
120 aa  85.1  3e-16  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_012918  GM21_0268  two component, sigma54 specific, transcriptional regulator, Fis family  37.39 
 
 
456 aa  84.7  4e-16  Geobacter sp. M21  Bacteria  n/a    normal  0.0540037 
 
 
-
 
NC_013216  Dtox_0970  two component, sigma54 specific, transcriptional regulator, Fis family  33.05 
 
 
459 aa  84.7  4e-16  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.000694494  normal  0.524712 
 
 
-
 
NC_007973  Rmet_3559  response regulator receiver domain-containing protein  39.47 
 
 
238 aa  84.3  4e-16  Cupriavidus metallidurans CH34  Bacteria  normal  0.0874597  normal 
 
 
-
 
NC_009767  Rcas_1114  response regulator receiver modulated serine phosphatase  41.44 
 
 
391 aa  84.7  4e-16  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_0827  acetoacetate metabolism regulatory protein AtoC  37.27 
 
 
460 aa  84.3  5e-16  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.158461 
 
 
-
 
NC_011146  Gbem_0283  two component, sigma54 specific, transcriptional regulator, Fis family  37.39 
 
 
456 aa  84.3  5e-16  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1347  response regulator receiver protein  36.04 
 
 
688 aa  84.3  5e-16  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0597  response regulator receiver modulated metal dependent phosphohydrolase  38.46 
 
 
334 aa  84  6e-16  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0731  response regulator receiver modulated serine phosphatase  38.79 
 
 
396 aa  84  7e-16  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_3091  two component, sigma54 specific, transcriptional regulator, Fis family  41.28 
 
 
457 aa  84  7e-16  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2668  response regulator receiver protein  38.79 
 
 
675 aa  84  7e-16  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0337  response regulator receiver protein  39.25 
 
 
139 aa  83.6  8e-16  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0132867 
 
 
-
 
NC_009483  Gura_2934  response regulator receiver protein  40.87 
 
 
129 aa  83.6  8e-16  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.0000000000852899  n/a   
 
 
-
 
NC_010814  Glov_1377  two component, sigma54 specific, transcriptional regulator, Fis family  41.75 
 
 
462 aa  83.6  8e-16  Geobacter lovleyi SZ  Bacteria  normal  0.244526  n/a   
 
 
-
 
NC_008228  Patl_1603  two component, sigma54 specific, Fis family transcriptional regulator  38.18 
 
 
449 aa  83.6  9e-16  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_1705  two component, sigma54 specific, Fis family transcriptional regulator  34.78 
 
 
502 aa  83.2  0.000000000000001  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_2109  two component, sigma54 specific, transcriptional regulator, Fis family  38.46 
 
 
515 aa  83.2  0.000000000000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_012918  GM21_2553  response regulator receiver protein  40.87 
 
 
126 aa  82.8  0.000000000000001  Geobacter sp. M21  Bacteria  n/a    hitchhiker  2.1194499999999997e-20 
 
 
-
 
NC_012034  Athe_1885  response regulator receiver protein  35.34 
 
 
1066 aa  82.8  0.000000000000001  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.166704  n/a   
 
 
-
 
NC_010531  Pnec_1772  two component transcriptional regulator, Fis family  38.66 
 
 
227 aa  83.2  0.000000000000001  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.979845 
 
 
-
 
NC_013223  Dret_2242  two component, sigma54 specific, transcriptional regulator, Fis family  38.14 
 
 
464 aa  83.6  0.000000000000001  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.719582 
 
 
-
 
NC_007517  Gmet_2453  two component, sigma54 specific, Fis family transcriptional regulator  37.72 
 
 
461 aa  83.2  0.000000000000001  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000196128  normal 
 
 
-
 
NC_009483  Gura_2678  two component, sigma-54 specific, Fis family transcriptional regulator  38.26 
 
 
457 aa  83.2  0.000000000000001  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_0126  response regulator receiver domain-containing protein  42.86 
 
 
120 aa  83.2  0.000000000000001  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_009943  Dole_1364  two component, sigma54 specific, Fis family transcriptional regulator  35.59 
 
 
485 aa  83.2  0.000000000000001  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008787  CJJ81176_1483  DNA-binding response regulator  35.96 
 
 
226 aa  83.2  0.000000000000001  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A4409  two component Fis family transcriptional regulator  40.35 
 
 
229 aa  83.2  0.000000000000001  Burkholderia xenovorans LB400  Bacteria  normal  0.352798  normal 
 
 
-
 
NC_008009  Acid345_0509  two component transcriptional regulator  35.59 
 
 
232 aa  82.8  0.000000000000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.163629  normal 
 
 
-
 
NC_010681  Bphyt_0316  two component transcriptional regulator, Fis family  40.35 
 
 
229 aa  83.2  0.000000000000001  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_0532  two component, sigma54 specific, transcriptional regulator, Fis family  41.51 
 
 
470 aa  82.8  0.000000000000001  Ammonifex degensii KC4  Bacteria  hitchhiker  0.00706375  n/a   
 
 
-
 
NC_011146  Gbem_1660  response regulator receiver protein  40.87 
 
 
126 aa  82.8  0.000000000000001  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_3603  response regulator receiver protein  42.73 
 
 
131 aa  83.2  0.000000000000001  Geobacter lovleyi SZ  Bacteria  normal  0.656399  n/a   
 
 
-
 
NC_009972  Haur_0852  GAF sensor hybrid histidine kinase  37.39 
 
 
1055 aa  82.4  0.000000000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
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