| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1603 |
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| Symbol | |
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| ID | 4173857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1908294 |
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| End bp | 1909643 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638054613 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_661179 |
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| Protein GI | 109897924 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTAAAG TTGAAGCGTC GTTAAAGCCA CAAATATTAC TCGTAGATGA TGACGAAAGT
TTACTACGGT TAATGGCTAT TCGCTTAGAA GGTGAAGGCT ATAGTGTGCA AAGTGCAGAA
GGCGGCAAAG AAGCGCTGCG CTTGATGAAT ACCCAAAATT TTGATGCGGT ATTAAGCGAC
CTTAGAATGC CAGGATTAGA TGGCTTAAGT TTATTTGAAG AAATTATGTC CTTGGGCAAA
GACCTGCCGG TTATTTTGAT GACAGCCCAC GGCACAATCC AAGATGCGGT TGAGGCGACC
CAAAGAGGCG TTTTTGGTTT CCTTACCAAG CCGATTGATC ATACTGAGTT GCGTGACCTG
CTAGCCAAAG CGGTGAGTCA AAGCCAAGGC TCGCAAACAA GTGCTTGGCG TGAGCAAATT
ATCACGCGTT CCATGCAAAT GGAGCAGTTG TTGGATCAAG CCCACCGAGT GGCGCAACGT
GACGTCAGTG TGTTGGTCAG CGGGGCAAGT GGAACGGGTA AAGAGTTATT GGCCAATGCC
ATTCACAAAG CCAGTAAAAG GGCGAATAAA CCGTTTGTGG CGATCAACTG TGGTGCTTTG
CCTGAAAACC TACTTGAGTC TGAACTTTTC GGGCACGCCA AAGGGGCCTT TACTGGTGCT
GTGAATGAAC ATCAAGGCTT GTTTCGTGAA GCAGATGGTG GGACGTTGTT TTTAGATGAA
ATTGGTGACA TGCCAACGCC GTTGCAAGTT AAATTACTTC GCGCATTGCA AGAGCAAGTT
ATTCGTCCTG TGGGTAGCAG CAAACAAATA CCTGTTGATG TTCGCATTAT TTCGGCGACT
CACAAAAATC TTGCAACAGA AATGAGTGAA GGGAATTTCC GTGAGGATCT GTATTATCGT
TTAAACGTTG TGAATTTAAC GCTGCCAACG CTGCGTGAAC GCTCAGAAGA TATTCCCTTG
CTGGCTCGTT ACCTACTTAA GAAAAGCGCC GAGCGCCATG AAGTGCGCGT CAGCCGTTTT
TCTGATGACG CCATGCAACT GTTGACCACT GAATTGTGGC CAGGCAATGT GCGCCAGTTA
GTCAATGTGG TTGAGCAGTG CGTTGCATTA ACACAAACAT CAGTGATTGC AGTGCACCTT
GTGGAACAAG CGCTGTCGAC GTCTGAGCAA AAATGGCCAA CGCTCACCGA AGCGCGAGAT
GCTTTTGAAC AGAGTTATCT GCTAAAACTG CTCAAAATGA CCGACGGGAA TGTTACTCGG
GCCGCTGAAA TTGCCGGTCG TAATCGCACC GATTTACACA AGTTGATGAA GAAACATGAT
TTGCACTCTA CTGATTTTAA GCATGACTAA
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| Protein sequence | MSKVEASLKP QILLVDDDES LLRLMAIRLE GEGYSVQSAE GGKEALRLMN TQNFDAVLSD
LRMPGLDGLS LFEEIMSLGK DLPVILMTAH GTIQDAVEAT QRGVFGFLTK PIDHTELRDL
LAKAVSQSQG SQTSAWREQI ITRSMQMEQL LDQAHRVAQR DVSVLVSGAS GTGKELLANA
IHKASKRANK PFVAINCGAL PENLLESELF GHAKGAFTGA VNEHQGLFRE ADGGTLFLDE
IGDMPTPLQV KLLRALQEQV IRPVGSSKQI PVDVRIISAT HKNLATEMSE GNFREDLYYR
LNVVNLTLPT LRERSEDIPL LARYLLKKSA ERHEVRVSRF SDDAMQLLTT ELWPGNVRQL
VNVVEQCVAL TQTSVIAVHL VEQALSTSEQ KWPTLTEARD AFEQSYLLKL LKMTDGNVTR
AAEIAGRNRT DLHKLMKKHD LHSTDFKHD
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