Gene EcDH1_1438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1438 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1553721 
End bp1555106 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content49% 
IMG OID 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionACX39108 
Protein GI260448686 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.445705 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGCTA TTAATCGCAT CCTTATTGTG GATGATGAAG ATAATGTTCG CCGTATGCTG 
AGCACCGCTT TTGCACTACA AGGATTCGAA ACACATTGTG CGAACAACGG ACGCACAGCA
TTACACCTGT TTGCCGATAT TCACCCTGAT GTGGTGTTGA TGGATATCCG CATGCCAGAG
ATGGACGGCA TCAAGGCACT AAAGGAGATG CGCAGCCATG AGACCCGGAC ACCCGTTATT
CTGATGACGG CCTATGCGGA AGTGGAAACC GCCGTCGAAG CGCTACGCTG CGGAGCCTTC
GACTATGTTA TTAAACCGTT TGATCTCGAT GAGTTGAATT TAATCGTTCA GCGCGCTTTA
CAACTCCAGT CAATGAAAAA AGAGATCCGT CATCTGCACC AGGCACTGAG CACCAGCTGG
CAATGGGGGC ACATTCTCAC CAACAGCCCG GCGATGATGG ACATCTGCAA AGACACCGCC
AAAATTGCCC TTTCTCAGGC CAGCGTCTTG ATTAGCGGTG AAAGCGGCAC CGGGAAAGAG
TTGATTGCCA GAGCGATTCA CTACAATTCG CGGCGGGCAA AGGGGCCGTT CATTAAAGTC
AACTGCGCGG CGCTGCCGGA ATCGTTGCTC GAAAGTGAAC TGTTTGGTCA TGAAAAAGGT
GCATTTACTG GTGCACAAAC CTTGCGTCAG GGATTATTTG AACGAGCCAA CGAAGGTACT
CTGCTCCTCG ACGAAATTGG CGAAATGCCG CTGGTACTAC AAGCCAAATT ACTACGCATT
CTACAGGAAC GGGAATTTGA ACGGATTGGC GGCCATCAGA CCATAAAAGT TGATATCCGC
ATCATTGCTG CCACCAACCG CGACTTGCAG GCAATGGTAA AAGAAGGCAC CTTCCGTGAA
GATCTCTTTT ATCGCCTTAA CGTTATTCAT TTAATACTGC CGCCTCTGCG CGATCGCCGG
GAAGATATTT CCCTGTTAGC TAATCACTTT TTGCAAAAAT TCAGTAGTGA GAATCAGCGC
GATATTATCG ACATCGATCC GATGGCAATG TCACTGCTTA CCGCCTGGTC ATGGCCGGGA
AATATTCGAG AGCTTTCCAA CGTTATTGAA CGCGCCGTCG TGATGAATTC AGGCCCGATC
ATTTTTTCTG AGGATCTTCC GCCACAGATT CGTCAGCCAG TCTGTAATGC TGGCGAGGTA
AAAACAGCCC CTGTCGGTGA GCGTAATTTA AAAGAGGAAA TTAAACGCGT CGAAAAACGC
ATCATTATGG AAGTGCTGGA ACAACAAGAA GGAAACCGAA CCCGCACTGC TTTAATGCTG
GGCATCAGTC GCCGTGCATT GATGTATAAA CTCCAGGAAT ACGGTATCGA TCCGGCGGAT
GTATAA
 
Protein sequence
MTAINRILIV DDEDNVRRML STAFALQGFE THCANNGRTA LHLFADIHPD VVLMDIRMPE 
MDGIKALKEM RSHETRTPVI LMTAYAEVET AVEALRCGAF DYVIKPFDLD ELNLIVQRAL
QLQSMKKEIR HLHQALSTSW QWGHILTNSP AMMDICKDTA KIALSQASVL ISGESGTGKE
LIARAIHYNS RRAKGPFIKV NCAALPESLL ESELFGHEKG AFTGAQTLRQ GLFERANEGT
LLLDEIGEMP LVLQAKLLRI LQEREFERIG GHQTIKVDIR IIAATNRDLQ AMVKEGTFRE
DLFYRLNVIH LILPPLRDRR EDISLLANHF LQKFSSENQR DIIDIDPMAM SLLTAWSWPG
NIRELSNVIE RAVVMNSGPI IFSEDLPPQI RQPVCNAGEV KTAPVGERNL KEEIKRVEKR
IIMEVLEQQE GNRTRTALML GISRRALMYK LQEYGIDPAD V