| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4000 |
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| Symbol | |
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| ID | 6161403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4482192 |
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| End bp | 4482914 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641666780 |
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| Product | two component Fis family transcriptional regulator |
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| Protein accession | YP_001793019 |
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| Protein GI | 171060670 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.000000203773 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCAACA TCCTAGTCGT CGACGACGAA ATGGGCATTC GCGCCCTGCT GCAAGAAATC
CTCACCGACG AAGGTCACTT CGTCGAACTG GCCGAGAACG CCGTCCAGGC GCGTGCCGCG
CGCGAGCGCC TGCGACCCGA TCTGGTCCTG CTCGACATCT GGATGCCCGA CGTCGACGGC
ATCACGCTGC TCAAGGAGTG GGGCACCACG GCGCAACTGG GCATGCCGGT GATCATGATG
TCGGGTCACG GCACGATCGA TACCGCGGTC GAGGCGACCA AATACGGGGC GATGGCGTTC
CTCGAGAAGC CGATCACCTT GCAGAAACTG CTGCGTGCGG TCGAGCAGGG CCTGGCCAAA
CCGGTCCCGC CGCCGCAGCG ATCGATGGCC CCGCTCGCGG CAACGATGCC GGCGCCTGTG
CCCATGCGCA ACGATCGCGA CTACCGCTCG ATCGATCTGC AGCCGATGCT GAACTCGGTG
CCTCAGCCGG TGATATCGGT GCTGTCCAGC GGCCCCCAGT CGGACCAGAA CTTTTCTCTC
GACCGGCCGC TGCGCGAGGC CAGAGATGCC TTCGAGAAGG CGTATTTCGA GTTCCACCTC
GCCCGCGAAA ACGGCAGCAT GACGCGGGTG GCCGAGCGTA CCGGCCTTGA GCGCACGCAC
CTGTATCGCA AGCTCAAGCA GTTGGGCGTG GACCTCAGCC GCAACAAGCG TGGCGGCAAT
TGA
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| Protein sequence | MANILVVDDE MGIRALLQEI LTDEGHFVEL AENAVQARAA RERLRPDLVL LDIWMPDVDG
ITLLKEWGTT AQLGMPVIMM SGHGTIDTAV EATKYGAMAF LEKPITLQKL LRAVEQGLAK
PVPPPQRSMA PLAATMPAPV PMRNDRDYRS IDLQPMLNSV PQPVISVLSS GPQSDQNFSL
DRPLREARDA FEKAYFEFHL ARENGSMTRV AERTGLERTH LYRKLKQLGV DLSRNKRGGN
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