| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0838 |
|---|
| Symbol | |
|---|
| ID | 5732739 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 948636 |
|---|
| End bp | 950009 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641277970 |
|---|
| Product | two component, sigma54 specific, Fis family transcriptional regulator |
|---|
| Protein accession | YP_001543614 |
|---|
| Protein GI | 159897367 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCAAAG CTACCGAACA ACGACATATT TTAATTGCTG ATGACGATCC AGGGATTCGT
GGTCTGTTAT GCGAGGTCTT TGATGAAGAG GGCTATCTGA CCGAACCTGC CGAGCATGGC
GGCGAAGTTT TAGCCAAAAT GACCAAGAAA CATCCCTATG ATCTGTTGAT TATGGATGTG
CGCATGCCTG GCCAAGATGG TTTAACCATT CTTGAGCAAT TGCGCAAAAA TGGCATCACC
ACCCCAGTGA TTATGATGAC GGCCCATGGT ACTTCATCAA CCGCGATTCG GGCGATTCAA
ATTGGTGCCT ACGATTACGT CATCAAGCCG TTTGATGTTG AAGAAGTAAC TTTGGTCGTC
AAACGCTTGT TTGATCATCA GCAATTGGCC TCAAAAGTGC GCGAACTCGA AGCCAAAAGT
TTTGATCCTC GTGACAAAAT GATTGGCAAT AGCCCAGCCA TGCAGGAGAT TTATAAGCAA
ATTGGGCGAG TTGCTCACAC CGACGCGACC GTTTTGATTA CGGGCGAAAC TGGCACAGGT
AAGGAAGTTT TGGCCAACCT GATTCACGTG AATTCAGCAC GGCGTAACGG GCCAATGGTT
AAAGTCAATT GTGCCGCCTT GCCAGAATCG TTGCTCGAAA GTGAATTGTT TGGCCATGAA
AAAGGCGCGT TTACTGGGGC GGTCGCTCAG CGCAAGGGTC GCTTTGAATT AGCCCATAAA
GGCTCGATCT TCCTTGATGA AATTGGCGAA ATGACCCTCG CTACCCAGAA AAAGTTGCTG
CGCATTCTGC AAGAACGCGA ATTTGAGCGG GTTGGTGGCA CAACCACCGT GCGAGTTGAT
GTGCGAGTGA TTGCGGCGAC TAACCGTGAT CTTGAAGCTG ACGTGCGAGC TGGCACCTTT
CGCGAAGATT TGTACTATCG TTTGAATGTG ATCACGTTGC ATTTACCAGC CCTGCGCCAA
CGAATTGGCG ATATTCCCTT ATTGGCTGAA TTTTTCTTGG ATAAATATCG TTACGCGCCC
TCATCACCAC CAGCTCGCAT CTCTGAAGAG GCCATGGAGC GCCTGAATAA CTACGATTGG
CCAGGCAATG TGCGCCAACT TGAGCATGAG ATCGAGCGAG CGGTGATTTT GTCTCGCGGC
AATGTGATTA CCAGTGAGCA TATGTCGTTG GTTCCATCAT CGCGCTCGGC CTTGCAAGTT
GATATTGCTG CCCGTTTGCG CGAAAAATCG ACGCTCGAGG AACTGCTGGC CGATGTTGAA
CGCTTGGCGT TGCAAGAAGC GCTGGTTCAG CACGACGATG ATCTCAAGGT GGCTGCTCGT
AGCCTTGGCC TGAGCGAAGC TGAGTTCCAA AAGCGCCAAA AGAAGTATAG TTAG
|
|---|
| Protein sequence | MTKATEQRHI LIADDDPGIR GLLCEVFDEE GYLTEPAEHG GEVLAKMTKK HPYDLLIMDV
RMPGQDGLTI LEQLRKNGIT TPVIMMTAHG TSSTAIRAIQ IGAYDYVIKP FDVEEVTLVV
KRLFDHQQLA SKVRELEAKS FDPRDKMIGN SPAMQEIYKQ IGRVAHTDAT VLITGETGTG
KEVLANLIHV NSARRNGPMV KVNCAALPES LLESELFGHE KGAFTGAVAQ RKGRFELAHK
GSIFLDEIGE MTLATQKKLL RILQEREFER VGGTTTVRVD VRVIAATNRD LEADVRAGTF
REDLYYRLNV ITLHLPALRQ RIGDIPLLAE FFLDKYRYAP SSPPARISEE AMERLNNYDW
PGNVRQLEHE IERAVILSRG NVITSEHMSL VPSSRSALQV DIAARLREKS TLEELLADVE
RLALQEALVQ HDDDLKVAAR SLGLSEAEFQ KRQKKYS
|
|---|
| |