| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0852 |
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| Symbol | |
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| ID | 5732753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 962161 |
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| End bp | 965328 |
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| Gene Length | 3168 bp |
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| Protein Length | 1055 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641277984 |
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| Product | GAF sensor hybrid histidine kinase |
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| Protein accession | YP_001543628 |
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| Protein GI | 159897381 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACGATG GTGATCGCGC GGTGTCAACC ATTTGGCATG AGCAACTTGA GTTGTTAACA
AAAACCGCTC AAGAACATTT TTGCCTACAC AATGCCGAAT TGTTGATTCA ACGCATTTGC
GCACTGATCA GCCACTATTT GCAAACGCCG CGGGTCACCA TCGCCCTCAT TCAACACGAT
AGTTTTGTGG CAGTTGCCAG CGCCCTTGGC CCTTTAGAAG ACCCAAGCTA TCAGCAAGCA
CCACGTTTGG TCTACAGCGC TGGAGCGGCT TGGTCGGCGG TTTGGCAACA GCAACGCAGC
ATAATCACTC CTGCGCCAAC CCCTGATGGA ATGTGCCAAC TCAGCGTGCC AATTCTGCGC
AATGCTCAAT TACTGGGATT AATCGATATT CAAAGCCCAC AGCCTGAGCA TAAACTAAGC
CTTTTACAGC CAATTATCGA GATGATCGCC CAGCAATTGG CGCTAGCCTT GGGCACACTT
CCTAGCCATC GTCAACATTA TCGCGAAGAT CAATGCACCC AAATCATCGA AAAAATCAAT
CTGCATATTT TGAAACATCT TGATGTATTA GCTGAGCCAC AACAGATTAT TGAATTAATT
TGGCGTTTTT TGCCGTTGCA AGGCGCTGCA TTGTATTTAT ACGATGAACA AGGTTTGGGC
TTATTAACCC ATATCAATGC AGCCCATGTG CCAACTCAGC GTGGAATTCA GCCGCTTAGC
CCCAGCTATT ACGAGCAAAT CGGCCAGCAA TCAAGCCATA ACTCGGCCAA AATGTTGCTA
GCAGGGCAGC ATGGCATCGA TATTCATGTA CCGGGCAATC AAGCCAATCT TGGTTTGTTA
CACTTAATTC CTGCCACACC GTTTGAAGCT AATGATTTGC TGGCCTTGCA AGAGTTTGGC
GCACGCTTAG GCTACATTTT AGAGCATAAT CGGCTGTTTC GCTCGATGTA TGTGGCCAAT
GAACGCAATG TGCTGTTTGC CCGCATCGTC AGCCATATTC GCCAAACCAT GAATTTGCGC
GAGGTCTGGC AGGATGTATT AGCAACCCTC GGTTTGGGTT TACGGGCCGA TTTCTGCACC
GTGGCTTTGT ATGAGCAAGA GCAACGCTTG CGCTTCCATG GAACCTACAC TACCTTGCTG
CTACCCGATC ATCTGACGGC TGCCGAGGCT TTGTTGCATA GCGAAATGCT GCAAGCTTTT
CAGCAAAAGC GCTCGCTGAC GATCGACGAA TATCACGATA GCAATGACCC TGAATTGCGC
GAACGGCTGC TGGCCTTGAA TATTCATGCC TTGGCTTGGG TTCCCTTGGT CGCCAACGGC
CAATGGCTGG GCTTTGTTTG CGTCTACAAA GTGCAGCGCC CCTTCCTCTG GACGCTTGAC
GATTTGCGCT TAATCAACGA TGTAGCCGAT CAATTGGCCT TAGCTTTGCG CCAAATGCAG
CTCTACGAGG CCGAACGCCA ACGCCGCCGC GAATTAGAAG CCTTACAAGA AATTATTCGA
GCGATCAGCG GCGAACTCAA TTTACATGCT TTATGTGGCA ATGTGGTCGA AAAAGTAATC
GATGTGTTTA AAGTTGCCGC CGCTGCGGTG CTGATGTGGC ACAACGATGG CAGCGCCATG
CAAGTCGTGG CCCACGCAGG TTTTTCCGAG CGCTATCTCG ATTCGCTGGA GATGAACACC
GATACAGTGA ATTATTGGAT TTCGCGCTTC AAGCCACCAA CACCCTTGTA TATTAGCGAT
ATTCGGCGTG TTTCGCTGAT TGGCGGCGAT CCAGCTAGCG CCGAGGGTTT GTCATCACTC
TTTGCTCAAC CACTGATGGT TGATGGGCGG TTTAGTGGTT GGTTGCAAAT GTACAGCCGT
GGCAATGTGC GGGTTTGGAA TCCTGAGGAA AGTCATCTAG CGGCCTCGAT TGCCCAACAA
ATTTCTCAAG CAATTCATAC AGCCCGGCGT TATGAGCAAG AGCATTTGCT ACGCACCGAT
GCCGAGCAAT CGTATTACCA GTTGCGCAGC GTGCTTGACG AGCTAGAAAA CACTCGCGAA
ACCTTGATCA ATTCGGAAAA GCTGCGGGCT TTGGGTCAAC TTGCCAGTGG CGTTGCCCAC
GATTTCAACA ATCTCTTAGC TTCAATTTTA GGTAATGCCC AATTTTTGCT GATTCACGAA
GATGATGCCG ATCGTCGCGA TGCCCTGCAA GTAATCGAAC GTGCCGCCAA AGATGGGGCG
GTCACGGTGC GCCGGATTCA AGAGTTTGCG CGGGCCTCCG AAACAATCTA CGACGATATT
GTTGATTTGC GTGATGTGGT TAATATTGCG CTCGAATTTA CCCGCCCTTC GTGGCGTGAT
AAAACCCAGC AACGTGGGAT TAAGCTCGAT ATTAGCACCC ATTTGGCTGC CGCCCATGTT
CAGGGTAGCG CCGCCGAATT ACGCGAAGTC TGCGTTAATT TAGTGGTCAA TGCAATTGAT
GTCTTGCCCC AAGGCGGCAC AATTACGATC AGCACTGGCA CAACTGGCGA GTGGTCGTAC
TTTACGATTG CTGATAACGG CCCAGGCATC GCCCCCGAAG ATCGCACCCG TATTTTCGAG
CCATTTTTCT CGACCAAGCC AATTGGCGAG GGCACAGGCA TGGGCTTGGC AGTGGCATTA
AGCATTGTGC AACGCCATCG TGGCAAATTA TTGACTGAAG ATGTGTATCC GCATGGCGCT
CGCTTCGTGG TGTTACTGCC AATTCATCAT GCACCCCAAC CAAAACCCCG CCCCGTTGCG
ATTGTGCCCA AAACTGCGGC CCAGCGTATT TTGGTGGTTG ATGATGAGCC AGCAGTACGC
AATATCGTGG CCAAAGTATT GCGCCACGAT CAGCATGAAG TGACCTTGGC TGGCTCTGGT
GAAGAAGCTT TGCGCTGGAT CGACGAACAA GCCTTTGATC TAATTATTTC CGATTTGGGA
ATGCCTGGGA TGAACGGCTG GGATGTGCTT GAACAAGCGC GACAACGCCG CCCAAATATC
ATCGCGATTT TAATTACTGG CTGGGGCTAC CAACATGATG CTGATTACGC TGCGGCGCGA
GGTGTTGATA GCGTGCTCGG CAAGCCCTTC GAGATGCAAA CCCTACGCAG CACCGTCGCC
GATTTGATTC AAGCTCGCAA CACACAAGGC CCAAACCGTG TATCATAG
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| Protein sequence | MYDGDRAVST IWHEQLELLT KTAQEHFCLH NAELLIQRIC ALISHYLQTP RVTIALIQHD
SFVAVASALG PLEDPSYQQA PRLVYSAGAA WSAVWQQQRS IITPAPTPDG MCQLSVPILR
NAQLLGLIDI QSPQPEHKLS LLQPIIEMIA QQLALALGTL PSHRQHYRED QCTQIIEKIN
LHILKHLDVL AEPQQIIELI WRFLPLQGAA LYLYDEQGLG LLTHINAAHV PTQRGIQPLS
PSYYEQIGQQ SSHNSAKMLL AGQHGIDIHV PGNQANLGLL HLIPATPFEA NDLLALQEFG
ARLGYILEHN RLFRSMYVAN ERNVLFARIV SHIRQTMNLR EVWQDVLATL GLGLRADFCT
VALYEQEQRL RFHGTYTTLL LPDHLTAAEA LLHSEMLQAF QQKRSLTIDE YHDSNDPELR
ERLLALNIHA LAWVPLVANG QWLGFVCVYK VQRPFLWTLD DLRLINDVAD QLALALRQMQ
LYEAERQRRR ELEALQEIIR AISGELNLHA LCGNVVEKVI DVFKVAAAAV LMWHNDGSAM
QVVAHAGFSE RYLDSLEMNT DTVNYWISRF KPPTPLYISD IRRVSLIGGD PASAEGLSSL
FAQPLMVDGR FSGWLQMYSR GNVRVWNPEE SHLAASIAQQ ISQAIHTARR YEQEHLLRTD
AEQSYYQLRS VLDELENTRE TLINSEKLRA LGQLASGVAH DFNNLLASIL GNAQFLLIHE
DDADRRDALQ VIERAAKDGA VTVRRIQEFA RASETIYDDI VDLRDVVNIA LEFTRPSWRD
KTQQRGIKLD ISTHLAAAHV QGSAAELREV CVNLVVNAID VLPQGGTITI STGTTGEWSY
FTIADNGPGI APEDRTRIFE PFFSTKPIGE GTGMGLAVAL SIVQRHRGKL LTEDVYPHGA
RFVVLLPIHH APQPKPRPVA IVPKTAAQRI LVVDDEPAVR NIVAKVLRHD QHEVTLAGSG
EEALRWIDEQ AFDLIISDLG MPGMNGWDVL EQARQRRPNI IAILITGWGY QHDADYAAAR
GVDSVLGKPF EMQTLRSTVA DLIQARNTQG PNRVS
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