Gene Dtox_0970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0970 
Symbol 
ID8427909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp993310 
End bp994689 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content39% 
IMG OID645033308 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionYP_003190482 
Protein GI258514260 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000694494 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.524712 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAAG TGTTGATAGT CGATGATGAA GAAGGCGTTT GTGAGATGCT GAAGGATGTC 
CTGGAAGATG AGGGTTTCGA AATTACATTG GCCTATAACG CTAAAGATGC TTTAAAGATT
ATGGAAACAG AATTTCCCGA TACGGTGCTT TTGGATATCA GACTGCCTGA TGCCGATGGA
ATAGAGGTTA TGGATAAGTT GAAACAAATG GGCATAGAGG TTCCGGTTAT TTTAATGACT
GCTTTCGGTA CAACTGAGAT TGCTATTCAG GCAATGAAGC AGGGAGCACA TGACTACCTG
AATAAACCCT TAAATTTAGA TGAATTGGTG CTTGCCGTAC AAAAATCAAT AAAAATGCAG
AGGTTGGTTT CTGAAGTAGC TATTTTGAGA GAAGAGTTAG ATCAAGAAAC AGATTCAGTA
GATAGCTTTA TCGGACAATC CAGGCATATG CAGGATGTGT TTAAAACTAT CGGTAAAGTT
GTTGACAGTG ATATTACTGT TTTGATACAA GGGGAAAGCG GCACCGGAAA AGAGGTAGTG
GCCAGGACTA TTCATAGCAA CAGCAGGCGC AGCAGCCGTC CTTTCATTAA GATTAATTGT
GCCACGATAC CTGAGCAGTT AATGGAGAGT GAATTGTTCG GGCATGAAAA GGGTTCTTTT
ACCGGGGCTG TCAGTCAGAA AGCAGGTAAA TTTGAGATAG CTCACAATGG CATTGTATTT
TTGGATGAGA TAGGTGAACT GCCGCTGCAC ACTCAAGCTA AGCTGCTGCG CGTTCTTCAA
GAAAAGGAAT TTGAGAGAGT TGGGGGCACT AAAAGTATTG AGGTGGATGT ACGTATTTTA
GCCGCCACCA ACAGAAATCT TGAAGATATG GTGCAAGAAG GCAAGTTTCG CGAGGACCTT
TACTACAGGT TAAATGTGGT TAATGTAAAA CTGCCGCCGC TTCGGGAAAG AAAAGAAGAT
ATATCGTTAT TAATTAATTA TTTTGTGAAA AAGTTTGCTC GAAAGTATAA TAAAAATATA
AGCGGCATAT CCCAGGAAGC AATGATTTTC GCAGAGAAAT ATGCTTGGCC GGGTAATGTC
AGAGAAATTA AAAACGTGTG TGAGCAGGCT GTTGTTATGG CCCGCAATTC AGTATTAATG
CTTGATGATA TGCCACTTAT AGGAAATGGC AATGGATTTT TGGAATTTAA GAACAATGCT
AAAATATCAT TGGATACTAA TGATAAAAGA TCTCTTAAAG ATATTGTTGC TGAAGTGGAA
AAACAAGTAA TTTTGAAATC ATTAAACGAA AATAACTGGA ATCGACAGAA TACAGCCAAA
GCACTGGGTC TGAACAGGAG GTCTTTGTAT GCGAAAATGA AAGAGTATGA TTTGTTGTAA
 
Protein sequence
MSKVLIVDDE EGVCEMLKDV LEDEGFEITL AYNAKDALKI METEFPDTVL LDIRLPDADG 
IEVMDKLKQM GIEVPVILMT AFGTTEIAIQ AMKQGAHDYL NKPLNLDELV LAVQKSIKMQ
RLVSEVAILR EELDQETDSV DSFIGQSRHM QDVFKTIGKV VDSDITVLIQ GESGTGKEVV
ARTIHSNSRR SSRPFIKINC ATIPEQLMES ELFGHEKGSF TGAVSQKAGK FEIAHNGIVF
LDEIGELPLH TQAKLLRVLQ EKEFERVGGT KSIEVDVRIL AATNRNLEDM VQEGKFREDL
YYRLNVVNVK LPPLRERKED ISLLINYFVK KFARKYNKNI SGISQEAMIF AEKYAWPGNV
REIKNVCEQA VVMARNSVLM LDDMPLIGNG NGFLEFKNNA KISLDTNDKR SLKDIVAEVE
KQVILKSLNE NNWNRQNTAK ALGLNRRSLY AKMKEYDLL