Gene Dtox_1013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1013 
Symbol 
ID8427952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1033876 
End bp1035246 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content42% 
IMG OID645033348 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionYP_003190522 
Protein GI258514300 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0616674 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGC CTGCTAAGCT GGTTCTGGTA GTAGATGATG AGAGCAGTGT ACGTGAGGTG 
CTCACGGATA TTTTCCTGGA CAGCGGCTTT AATGTGAAAA CAGCCTCAAA CGGTCGGGAT
GCTCTGGATA AAATTGATCA ATATCAGCCG GATGTTGTTT TCATGGATAT AAGAATGCCT
GAAATGGGCG GTATTGAGGT GCTGGAAATT ATAAATAGAA GGGGCAGTCA AATACCAATA
ATTCTTATGA CTGCCTACGG ATCAACGGAA ACGACGATTG AGGCTATGAA ATTAGGTGCT
TTTGATTATT TAATGAAGCC TTTAAATATT AAGGAAGTCA TGAGGGTTTT GGAAAAGGCT
GTAGAAATAA AAGAATTGAT TGATGATAAT ACAGATATGC CGGATGAAGA TATTGAATAT
AAAGAAGATC AGATGATCGG TTTTTCACCT ATTATGCAGA ATGTTTATAA AATTATCGGC
CGGGTTGCCA ACACCTCAGC TACAGTGTTA ATCCGCGGGG AAAGCGGTAC CGGCAAAGAG
CTGGTGGCAC GGGCCATTCA TTATAACAGT GTGCGAAAGG ATAAACCTTT TATAAAAATC
AATTGCGCCT CCATACCGGA AAGTTTGTTG GAAAGTGAAC TGTTTGGTTA TGAAAGAGGG
GCCTTTACAG GAGCAGTGAG TGTTAAATCA GGCAGGTTTG AGCTGGCAAA TAAAGGGACA
TTGTTTTTGG ATGAAATTGG AGAAATGTCT CCTGCTTTAC AGGCAAAACT GCTAAGAGTG
CTGCAGGAGA AGGAATTTGA CAGGTTGGGC GGTACTGAAA CTATTAAGGT TGATGTGCGG
ATTATTGCCG CTACGAATAT CGACTTGGAA AAGTCTATCG AGGAAGGGGT ATTTAGGGAG
GACCTGTTTT ATCGCCTTAA TGTTGTAGAT ATTATGTTGC CTCCCTTAAG AGAGAGAAAA
GAAGATATAC CCGCACTGGT GGACTATATC ATTAAATGCT GCAATGTTGA GTACAGTAAG
GCTGTAACGG GTTTTTCCAA TGAGGCAGCC GCAATGTTGA GAGCCTATGA CTGGCCGGGC
AATGTACGAG AATTGAAAAA CCTGTGTGAG CGAGCCGTGT TGATGTCAAG CGGGCCGGTT
CTTACTCTGG ATGACCTGCC AATAAGTCTA AAAAAGGGTT CTAAACGGTT AAGCTGGCTT
TCTGAGATTG AAGGAGAATC TTTTAAAGAG ATAGTCTCGG AGGTTGAACG GGAGGTTATA
ATTAAAGCGC TGGAAGATAA TAACTGGAAC AGATCGGCAG CTGCCAGCGC CTTAAAAATG
AACCGCAGCT CGTTTTATGC AAAGATGAAA GAGCTGGGTA TCATCGAATA A
 
Protein sequence
MTKPAKLVLV VDDESSVREV LTDIFLDSGF NVKTASNGRD ALDKIDQYQP DVVFMDIRMP 
EMGGIEVLEI INRRGSQIPI ILMTAYGSTE TTIEAMKLGA FDYLMKPLNI KEVMRVLEKA
VEIKELIDDN TDMPDEDIEY KEDQMIGFSP IMQNVYKIIG RVANTSATVL IRGESGTGKE
LVARAIHYNS VRKDKPFIKI NCASIPESLL ESELFGYERG AFTGAVSVKS GRFELANKGT
LFLDEIGEMS PALQAKLLRV LQEKEFDRLG GTETIKVDVR IIAATNIDLE KSIEEGVFRE
DLFYRLNVVD IMLPPLRERK EDIPALVDYI IKCCNVEYSK AVTGFSNEAA AMLRAYDWPG
NVRELKNLCE RAVLMSSGPV LTLDDLPISL KKGSKRLSWL SEIEGESFKE IVSEVEREVI
IKALEDNNWN RSAAASALKM NRSSFYAKMK ELGIIE