Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0283 |
Symbol | |
ID | 6783109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 341194 |
End bp | 342564 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642766252 |
Product | two component, sigma54 specific, transcriptional regulator, Fis family |
Protein accession | YP_002137110 |
Protein GI | 197116683 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCAAGA TAAAGATTAT GGTCGTCGAT GACGAGCACC TGATCCGCTG GTCTTTGGAG CAAAACCTGA AGAAGCAGGG ATACGAAGTG GTCACCGCGG GGACCGGCGA AGACGCGCTC CGTCTGGCCC GCGAGGAGCA GCCCGACCTA GTGCTTCTGG ATTACCATCT TCCCGGGATC AACGGTCTGG AGGTCCTGCA GCGGATCAAG GAGCTCGACG AGGACATCCT GGTCATCATG GTGACGGCGC AGGGGGGGCT GGAGACGGCC GTCAACACCA TGCGCCACGG CGCCTATGAT TACATCAACA AGCCGTTCAA CCTGGACGAG ATGGCGCTGG TGATCCGCAA GGCGCTGGAG ACCTCGGAGC TGCGCCGCGA GGTGGTGCAG TTAAGGAGCG AGCACAAGAA GCAGGGACCG CCCACAATCC TGGGTAATTC CAAGCACATG AAAAACGTGC TGGAGATGAT GGCCAAGGTC GCCAAGAGCG ACGCCTCCAC CGTGCTGGTG CAGGGGGAAT CGGGAACCGG GAAGGAGTTG GTGGCGAAGT ACATCCACTA CGAGTCAGCC CGGGCCGAAA AGCCGTTCGT GGCCATCAAC TGTGCGGCCG TACCTGCCAC CCTTCTGGAG AGCGAGCTTT TCGGCCACGA GAAGGGGGCC TTTACCGATG CGAAGAACTC CAAGAAGGGT CTTTTCGAGC TGGCCGACGG CGGGACCGTG TTCCTTGATG AGATCGGGGA CATGGAAATC GGGATGCAGG CGAAGCTGCT CCGCTTCCTG GAGGACCGGA CCTTCCGGCG CATCGGCGGC TCGAAGATGA TCCCGGTCGA CGTCAGGATC GTCTCAGCGA CCAACAAGGA CCTCCTGAAG GCGATCGAGG ACAAGAGCTT CAGGAACGAC CTCTACTACC GGCTCCAGGT GATTCCGATC TTCCTCCCCT CGCTGCGCGA GCGCAAGGAG GACATCCTGG TGTTGGCCAA CTACTTCATC GAGGTCTTCT CCAAGGAGTT CGGCAAGCCG ACCAAAGGGA TCTCCAGCAT GGCGGAGAAG CTCCTGGTGG AATACAACTG GCCCGGCAAC ATCCGCGAGT TGAAGAACGT CATCGAGCGC GCCATCATCC TGGGTAACGA CGAGAACCTC CTTTTGGAGA ACCTGCCGCT GGAGATCGTC GCCAAGGCGA GTCAAGTCAC CGTGCCGCTC ACCACCTTCA AGCTCCCCCC CGAGGGGATC GACATCGAAG AGGTGGAGCG CGAGTTGATC AAGCAGTCGC TGGAGATGAC CGACTATAAC CAGTCCAAAG CCGCCAAGAA GCTGAACCTG GGCATCGACG CCTTCCGTTA CCGGATGAAG AAATTCGGGT TCCTTAAGTA G
|
Protein sequence | MRKIKIMVVD DEHLIRWSLE QNLKKQGYEV VTAGTGEDAL RLAREEQPDL VLLDYHLPGI NGLEVLQRIK ELDEDILVIM VTAQGGLETA VNTMRHGAYD YINKPFNLDE MALVIRKALE TSELRREVVQ LRSEHKKQGP PTILGNSKHM KNVLEMMAKV AKSDASTVLV QGESGTGKEL VAKYIHYESA RAEKPFVAIN CAAVPATLLE SELFGHEKGA FTDAKNSKKG LFELADGGTV FLDEIGDMEI GMQAKLLRFL EDRTFRRIGG SKMIPVDVRI VSATNKDLLK AIEDKSFRND LYYRLQVIPI FLPSLRERKE DILVLANYFI EVFSKEFGKP TKGISSMAEK LLVEYNWPGN IRELKNVIER AIILGNDENL LLENLPLEIV AKASQVTVPL TTFKLPPEGI DIEEVERELI KQSLEMTDYN QSKAAKKLNL GIDAFRYRMK KFGFLK
|
| |