| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A3402 |
|---|
| Symbol | |
|---|
| ID | 3610857 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | - |
|---|
| Start bp | 3731588 |
|---|
| End bp | 3732298 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637692829 |
|---|
| Product | helix-turn-helix, Fis-type |
|---|
| Protein accession | YP_297604 |
|---|
| Protein GI | 73543084 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0473986 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACGA TCCTCGTAGT CGATGACGAA ATGGGAATCC GGGAACTGCT CTCGGAAATC
CTGAGCGACG AAGGCCATGT GGTCGAAGTC GCCGAGAACG CGCAGCAGGC ACGCGAATAC
CGTTCGGGCA CGACCCCTGA TCTCGTGCTG CTCGATATCT GGATGCCCGA CACCGATGGC
GTGACATTGC TCAAGGAGTG GTCCGCGCAA GGCCAGCTGA CAATGCCGGT GATCATGATG
TCTGGCCATG CCACCATCGA CACCGCGGTC GAGGCCACCA AGATCGGCGC GCTGAATTTC
CTGGAAAAGC CGATCGCGCT GCAGAAACTG CTGTCGGCAG TGGAGCAGGG CCTGGCCCGT
GGTATCGAAC GCCCGCGCGC AGCGCCCGCG GCAATGCCCG CACCGGCGGC GCCGGCTATC
GAAACCGCAT TGGCACCGGC CTCTGCCGAG GCCAGCCTCG ACGCCGCGGC CAACGGCAGC
AATGCCGCGC GCCCGCCCGA AGCCGAAATG CACTTCTCGT TCGACATGCC GCTGCGCGAG
GCGCGGGACC TGTTCGAGCG TGCCTACTTC GAGTACCACC TGGTGCGCGA ACACGGCAGC
ATGACGCGCG TGGCCGAGAA GACCGGACTG GAACGTACGC ACCTCTACCG CAAGCTCAAG
CAGCTTGGCG TGGAGCTGGG CCGCAACAAG CAGGAACCTG CGGAGCAGTG A
|
|---|
| Protein sequence | MATILVVDDE MGIRELLSEI LSDEGHVVEV AENAQQAREY RSGTTPDLVL LDIWMPDTDG
VTLLKEWSAQ GQLTMPVIMM SGHATIDTAV EATKIGALNF LEKPIALQKL LSAVEQGLAR
GIERPRAAPA AMPAPAAPAI ETALAPASAE ASLDAAANGS NAARPPEAEM HFSFDMPLRE
ARDLFERAYF EYHLVREHGS MTRVAEKTGL ERTHLYRKLK QLGVELGRNK QEPAEQ
|
|---|
| |