More than 300 homologs were found in PanDaTox collection
for query gene Dtox_1973 on replicon NC_013216
Organism: Desulfotomaculum acetoxidans DSM 771



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013216  Dtox_1973  response regulator receiver protein  100 
 
 
127 aa  258  3e-68  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.00115006  hitchhiker  0.0000141072 
 
 
-
 
NC_013216  Dtox_0055  response regulator receiver protein  60.16 
 
 
133 aa  146  1.0000000000000001e-34  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.0166098  hitchhiker  0.000805427 
 
 
-
 
NC_009253  Dred_3178  response regulator receiver protein  52.14 
 
 
135 aa  139  9e-33  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00591737  n/a   
 
 
-
 
NC_011830  Dhaf_4841  response regulator receiver protein  42.61 
 
 
118 aa  114  6e-25  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.202718  n/a   
 
 
-
 
NC_010424  Daud_2177  response regulator receiver protein  46.49 
 
 
120 aa  105  2e-22  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_2406  response regulator receiver domain-containing protein  44.55 
 
 
124 aa  102  2e-21  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_3857  response regulator receiver protein  44.14 
 
 
122 aa  99.8  1e-20  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.161717  n/a   
 
 
-
 
NC_013205  Aaci_2784  response regulator receiver protein  43.1 
 
 
125 aa  99  2e-20  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.0945133  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5134  response regulator receiver protein  44.14 
 
 
122 aa  98.2  3e-20  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0135031  n/a   
 
 
-
 
NC_003909  BCE_5466  stage 0 sporulation protein F  44.14 
 
 
122 aa  97.8  4e-20  Bacillus cereus ATCC 10987  Bacteria  normal  0.0750811  n/a   
 
 
-
 
NC_005945  BAS5185  stage 0 sporulation protein F  44.14 
 
 
122 aa  97.8  4e-20  Bacillus anthracis str. Sterne  Bacteria  normal  0.0413406  n/a   
 
 
-
 
NC_005957  BT9727_5020  stage 0 sporulation protein F  44.14 
 
 
122 aa  97.8  4e-20  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.000000180816  n/a   
 
 
-
 
NC_006274  BCZK5036  stage 0 sporulation protein F  44.14 
 
 
122 aa  97.8  4e-20  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000000486089  n/a   
 
 
-
 
NC_011773  BCAH820_5429  sporulation initiation phosphotransferase F  44.14 
 
 
122 aa  97.8  4e-20  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  6.26925e-31 
 
 
-
 
NC_007530  GBAA_5581  stage 0 sporulation protein F  44.14 
 
 
122 aa  97.8  4e-20  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0132264  n/a   
 
 
-
 
NC_011658  BCAH187_A5514  sporulation initiation phosphotransferase F  44.14 
 
 
122 aa  97.8  4e-20  Bacillus cereus AH187  Bacteria  hitchhiker  0.000000170867  n/a   
 
 
-
 
NC_011725  BCB4264_A5459  sporulation initiation phosphotransferase F  44.14 
 
 
122 aa  97.8  4e-20  Bacillus cereus B4264  Bacteria  hitchhiker  0.000856307  n/a   
 
 
-
 
NC_011772  BCG9842_B5493  sporulation initiation phosphotransferase F  44.14 
 
 
122 aa  97.1  7e-20  Bacillus cereus G9842  Bacteria  hitchhiker  0.0000162821  unclonable  2.17721e-26 
 
 
-
 
NC_013411  GYMC61_3444  response regulator receiver protein  41.23 
 
 
120 aa  97.1  8e-20  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007519  Dde_3715  multi-sensor signal transduction histidine kinase  44.76 
 
 
653 aa  96.3  1e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2915  sigma-54 dependent DNA-binding response regulator  39.66 
 
 
457 aa  95.1  3e-19  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_2412  response regulator receiver protein  39.81 
 
 
123 aa  94.4  5e-19  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.18168  n/a   
 
 
-
 
NC_008751  Dvul_2720  multi-sensor signal transduction histidine kinase  45.1 
 
 
657 aa  94  6e-19  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.312815 
 
 
-
 
NC_012793  GWCH70_3334  response regulator receiver protein  42.99 
 
 
120 aa  94  7e-19  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0555  two component, sigma54 specific, Fis family transcriptional regulator  37.93 
 
 
457 aa  92.4  2e-18  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_3740  response regulator receiver protein  39.17 
 
 
135 aa  91.7  3e-18  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.119956  normal 
 
 
-
 
NC_010814  Glov_3076  two component, sigma54 specific, transcriptional regulator, Fis family  39.09 
 
 
454 aa  91.3  4e-18  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2453  two component, sigma54 specific, Fis family transcriptional regulator  38.66 
 
 
461 aa  90.5  8e-18  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000196128  normal 
 
 
-
 
NC_007519  Dde_3003  two component Fis family transcriptional regulator  44.04 
 
 
465 aa  90.1  8e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.0697126  n/a   
 
 
-
 
NC_013216  Dtox_0970  two component, sigma54 specific, transcriptional regulator, Fis family  39.64 
 
 
459 aa  89  2e-17  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.000694494  normal  0.524712 
 
 
-
 
NC_009483  Gura_0495  two component, sigma-54 specific, Fis family transcriptional regulator  35.34 
 
 
456 aa  89  2e-17  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_2392  two component, sigma54 specific, transcriptional regulator, Fis family  43.4 
 
 
458 aa  88.2  3e-17  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0321511  normal 
 
 
-
 
NC_013525  Tter_0790  two component, sigma54 specific, transcriptional regulator, Fis family  36.75 
 
 
466 aa  88.6  3e-17  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012034  Athe_1885  response regulator receiver protein  41.96 
 
 
1066 aa  87.8  5e-17  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.166704  n/a   
 
 
-
 
NC_009972  Haur_2366  two component, sigma54 specific, Fis family transcriptional regulator  42.45 
 
 
385 aa  87.4  7e-17  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000342445  n/a   
 
 
-
 
NC_011146  Gbem_0283  two component, sigma54 specific, transcriptional regulator, Fis family  35.34 
 
 
456 aa  86.3  1e-16  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0268  two component, sigma54 specific, transcriptional regulator, Fis family  35.34 
 
 
456 aa  86.3  1e-16  Geobacter sp. M21  Bacteria  n/a    normal  0.0540037 
 
 
-
 
NC_009483  Gura_0085  two component, sigma-54 specific, Fis family transcriptional regulator  35.96 
 
 
452 aa  86.3  1e-16  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_1934  two component, sigma54 specific, Fis family transcriptional regulator  39.62 
 
 
476 aa  86.7  1e-16  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.808753  normal  0.132653 
 
 
-
 
NC_010002  Daci_1576  CheA signal transduction histidine kinase  37.82 
 
 
2137 aa  85.9  2e-16  Delftia acidovorans SPH-1  Bacteria  normal  0.167147  normal  0.557453 
 
 
-
 
NC_011146  Gbem_3413  two component, sigma54 specific, transcriptional regulator, Fis family  35.54 
 
 
453 aa  85.5  2e-16  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008607  Ppro_3647  two component, sigma54 specific, Fis family transcriptional regulator  36.04 
 
 
451 aa  85.9  2e-16  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0811  nitrogen regulation protein NtrX  37.5 
 
 
456 aa  85.1  3e-16  Geobacter sulfurreducens PCA  Bacteria  normal  0.686874  n/a   
 
 
-
 
NC_007498  Pcar_2345  two component signal transduction response regulator  39.62 
 
 
455 aa  85.1  3e-16  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00459366  n/a   
 
 
-
 
NC_009943  Dole_1347  response regulator receiver protein  39.29 
 
 
688 aa  84.7  3e-16  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_0710  two component, sigma54 specific, Fis family transcriptional regulator  38.68 
 
 
456 aa  85.1  3e-16  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3286  two component, sigma54 specific, transcriptional regulator, Fis family  39.62 
 
 
458 aa  84.7  4e-16  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2550  multi-sensor signal transduction histidine kinase  38.74 
 
 
685 aa  84.7  4e-16  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_012918  GM21_3475  two component, sigma54 specific, transcriptional regulator, Fis family  35.54 
 
 
453 aa  84.7  4e-16  Geobacter sp. M21  Bacteria  n/a    normal  0.0804749 
 
 
-
 
NC_009523  RoseRS_3770  response regulator receiver protein  39.09 
 
 
391 aa  84.7  4e-16  Roseiflexus sp. RS-1  Bacteria  normal  unclonable  0.0000112062 
 
 
-
 
NC_011891  A2cp1_1954  two component, sigma54 specific, transcriptional regulator, Fis family  40.54 
 
 
464 aa  84.3  5e-16  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.611403  n/a   
 
 
-
 
NC_009483  Gura_3740  two component, sigma-54 specific, Fis family transcriptional regulator  34.71 
 
 
454 aa  84.3  5e-16  Geobacter uraniireducens Rf4  Bacteria  normal  0.0840186  n/a   
 
 
-
 
NC_009943  Dole_2739  two component, sigma54 specific, Fis family transcriptional regulator  39.25 
 
 
451 aa  84.3  5e-16  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.693002  n/a   
 
 
-
 
NC_007948  Bpro_1140  CheA signal transduction histidine kinases  36.36 
 
 
2070 aa  84.3  5e-16  Polaromonas sp. JS666  Bacteria  normal  normal  0.607614 
 
 
-
 
NC_009767  Rcas_1114  response regulator receiver modulated serine phosphatase  40 
 
 
391 aa  84.3  5e-16  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_1869  two component, sigma54 specific, transcriptional regulator, Fis family  40.54 
 
 
464 aa  84  6e-16  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_0827  acetoacetate metabolism regulatory protein AtoC  42.02 
 
 
460 aa  84  6e-16  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.158461 
 
 
-
 
NC_013223  Dret_0868  multi-sensor signal transduction histidine kinase  42.31 
 
 
650 aa  84.3  6e-16  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_002936  DET0624  response regulator  35.71 
 
 
334 aa  84  7e-16  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1377  two component, sigma54 specific, transcriptional regulator, Fis family  36.79 
 
 
462 aa  83.6  8e-16  Geobacter lovleyi SZ  Bacteria  normal  0.244526  n/a   
 
 
-
 
NC_012918  GM21_0962  two component, sigma54 specific, transcriptional regulator, Fis family  38.68 
 
 
458 aa  83.6  8e-16  Geobacter sp. M21  Bacteria  n/a    normal  0.277353 
 
 
-
 
NC_007517  Gmet_0010  PAS/PAC sensor hybrid histidine kinase  40.18 
 
 
508 aa  83.6  8e-16  Geobacter metallireducens GS-15  Bacteria  normal  0.0502065  normal 
 
 
-
 
NC_007517  Gmet_0776  two component, sigma54 specific, Fis family transcriptional regulator  38.53 
 
 
454 aa  83.6  9e-16  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_3335  two component, sigma-54 specific, Fis family transcriptional regulator  36.11 
 
 
458 aa  83.6  9e-16  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0597  response regulator receiver modulated metal dependent phosphohydrolase  34.75 
 
 
334 aa  83.2  0.000000000000001  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1320  sigma-54 dependent DNA-binding response regulator  36.84 
 
 
460 aa  83.2  0.000000000000001  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_0639  two component, sigma54 specific, Fis family transcriptional regulator  39.83 
 
 
455 aa  82.8  0.000000000000001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_2009  two component, sigma54 specific, Fis family transcriptional regulator  40.54 
 
 
463 aa  83.2  0.000000000000001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_0673  two component, sigma54 specific, transcriptional regulator, Fis family  38.39 
 
 
457 aa  83.6  0.000000000000001  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_0673  two component, sigma54 specific, transcriptional regulator, Fis family  38.39 
 
 
458 aa  83.6  0.000000000000001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0821  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  37.27 
 
 
1139 aa  83.2  0.000000000000001  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.187038 
 
 
-
 
CP001509  ECD_02147  fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein  36.04 
 
 
461 aa  82  0.000000000000002  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1438  two component, sigma54 specific, transcriptional regulator, Fis family  36.04 
 
 
461 aa  82  0.000000000000002  Escherichia coli DH1  Bacteria  normal  0.445705  n/a   
 
 
-
 
NC_009253  Dred_1312  two component, sigma54 specific, Fis family transcriptional regulator  39.05 
 
 
455 aa  82  0.000000000000002  Desulfotomaculum reducens MI-1  Bacteria  normal  0.502008  n/a   
 
 
-
 
NC_011992  Dtpsy_2897  CheA signal transduction histidine kinase  36.52 
 
 
2026 aa  82.8  0.000000000000002  Acidovorax ebreus TPSY  Bacteria  normal  0.855039  n/a   
 
 
-
 
NC_009800  EcHS_A2361  acetoacetate metabolism regulatory protein AtoC  36.04 
 
 
461 aa  82  0.000000000000002  Escherichia coli HS  Bacteria  normal  0.18992  n/a   
 
 
-
 
NC_013216  Dtox_1013  two component, sigma54 specific, transcriptional regulator, Fis family  35.85 
 
 
456 aa  82.4  0.000000000000002  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.0616674 
 
 
-
 
NC_007643  Rru_A1385  acetoacetate metabolism regulatory protein AtoC  44.14 
 
 
460 aa  82.4  0.000000000000002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_02106  hypothetical protein  36.04 
 
 
461 aa  82  0.000000000000002  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_1430  acetoacetate metabolism regulatory protein AtoC  36.04 
 
 
461 aa  82  0.000000000000002  Escherichia coli ATCC 8739  Bacteria  normal  0.324678  hitchhiker  0.00137179 
 
 
-
 
NC_010498  EcSMS35_2369  acetoacetate metabolism regulatory protein AtoC  35.96 
 
 
461 aa  82.4  0.000000000000002  Escherichia coli SMS-3-5  Bacteria  normal  0.0790211  normal 
 
 
-
 
NC_008782  Ajs_3574  CheA signal transduction histidine kinases  36.52 
 
 
2026 aa  82.4  0.000000000000002  Acidovorax sp. JS42  Bacteria  normal  0.906934  normal  0.231875 
 
 
-
 
NC_009523  RoseRS_0337  response regulator receiver protein  35.77 
 
 
139 aa  81.3  0.000000000000004  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0132867 
 
 
-
 
NC_007498  Pcar_2017  response regulator CheY  36.97 
 
 
129 aa  81.3  0.000000000000004  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0009  multi-sensor signal transduction histidine kinase  39.64 
 
 
508 aa  81.3  0.000000000000004  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_4419  two component, sigma54 specific, Fis family transcriptional regulator  35.34 
 
 
448 aa  81.3  0.000000000000005  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_3603  response regulator receiver protein  40 
 
 
131 aa  80.9  0.000000000000006  Geobacter lovleyi SZ  Bacteria  normal  0.656399  n/a   
 
 
-
 
NC_013132  Cpin_6438  putative two component, sigma54 specific, transcriptional regulator, Fis family  36.04 
 
 
394 aa  80.5  0.000000000000007  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.00615091  normal  0.383003 
 
 
-
 
NC_007517  Gmet_2924  two component, sigma54 specific, Fis family transcriptional regulator  38.74 
 
 
470 aa  80.5  0.000000000000007  Geobacter metallireducens GS-15  Bacteria  normal  0.777319  hitchhiker  0.0000000000564278 
 
 
-
 
NC_009253  Dred_2891  response regulator receiver protein  35.96 
 
 
135 aa  80.5  0.000000000000008  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00486665  n/a   
 
 
-
 
NC_002939  GSU0598  sigma-54 dependent DNA-binding response regulator  38.74 
 
 
470 aa  80.1  0.00000000000001  Geobacter sulfurreducens PCA  Bacteria  normal  0.885444  n/a   
 
 
-
 
NC_011769  DvMF_1993  two component, sigma54 specific, transcriptional regulator, Fis family  35.45 
 
 
486 aa  79.7  0.00000000000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008752  Aave_0905  CheA signal transduction histidine kinase  37.39 
 
 
2164 aa  79.7  0.00000000000001  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.384813 
 
 
-
 
NC_008609  Ppro_1655  two component, sigma54 specific, Fis family transcriptional regulator  36.04 
 
 
462 aa  79.3  0.00000000000001  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.000025661  n/a   
 
 
-
 
NC_009943  Dole_1364  two component, sigma54 specific, Fis family transcriptional regulator  39.81 
 
 
485 aa  79.7  0.00000000000001  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4622  CheA signal transduction histidine kinase  35.59 
 
 
2022 aa  79.7  0.00000000000001  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0008  sensory box histidine kinase/response regulator  38.39 
 
 
516 aa  79.3  0.00000000000002  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1510  two component, sigma54 specific, Fis family transcriptional regulator  33.33 
 
 
448 aa  79.3  0.00000000000002  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_3017  CheA signal transduction histidine kinases  36.52 
 
 
1983 aa  79  0.00000000000002  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_2853  two component, sigma54 specific, Fis family transcriptional regulator  36.36 
 
 
476 aa  79.3  0.00000000000002  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
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