| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1705 |
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| Symbol | |
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| ID | 6115946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2120969 |
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| End bp | 2122477 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641633187 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001760085 |
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| Protein GI | 170726059 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATTG ATCACTCGTT TACGGTTTTA CTTGTGGAAG ATAGTATGTC TTTAGGCGCA
CTTTATACTG AGTATCTGAG GGCTGAAGGA GCTAAGGTCA CTCATGTTAA TCATGGAGAG
GATGCGTTAG CGGAAATGGA GCGATGGCAA CCTGATCTTT TAGTGCTAGA TATTAAGCTT
CCCGATATGT CGGGAATGGA TATTTTGCAA AAAGTTCAGT CTAACTATAC TGATATTACT
GTCATTATGA TCACAGCCCA TGGCACGATT GATCTGGCTG TTGAATCGAT GAAGTCTGGT
GCTTTTGATT TCTTAGTCAA ACCTTTTGAT GCTAAACGCC TCTCTATTAC CGTCCGTAAT
GCCCTTAAAC AACGCCAGCT GGTCAATTTA GTCGCCAAGT ATGAACAGAG TTTGCCAAAA
GCAAACTACA AAGGGTTTGT TGGTGAATCA CTGTCGATGC AAGCTGTATA TAAAACCATA
GATTGCGTTG CAAACAGTAA AGCTTCAGTG TTTATTGTAG GAGAAAGCGG TACAGGCAAG
GAGGTGTGTG CTCATGCCAT CCATCATGCA GGAAATAGAC GAGACAATGC ATTTGTGGCA
CTTAACTGTG CTTCAATTCC CAAGGACCTT ATAGAGAGTG AGATCTTTGG TCATACCAAA
GGAGCATTTA CCGGAGCTGT GGCTAATCGA GATGGTGCGG CGAGCCGTGC TGATGGTGGA
ACACTTTTTC TTGATGAAAT TTGTGAAATG GATCTAGAGC TTCAGAGTAA GTTATTACGT
TTTATCCAGA CTGGTATTTT TCAAAAAGTG GGAGGAACCA AGGAGGAGAG GGTTGATGTG
CGCTTTGTCA GCGCAACGAA TCGGATCCCT TGGGAAGAGG TGAAGCATGG ACGTTTTCGC
GAAGATCTTT TTTATCGTTT ACATGTGATC CCCATTGAGT TGCCGCCTCT TCGAATGAGA
GGAAAAGATA TTACCCTGCT AGCCAATAAG TTATTGAAAG AATATAATAA TGAAGAGGGG
AAACAGTTTA AAAGTTTAAG CAGTGATACT AAGAAAATAC TGCAGTCTTA TGATTGGCCT
GGCAATGTCA GGCAGTTACA AAATATCATA AGGCAGGTGG TTGTTTTAAA CTCATCAGAT
ATTGTTGAGG CTTCGATGTT ACCACCACAA CTGACCTCGA CGTTGAGTCG CACTAGCTTG
GTTCAGCCTT TAATTGGAGT GCAATCAACG GCTGAGGATA ATAGAGGTTT AACGGATGTT
GTTTCTTGTC TATCTTCTGA GGATGGTAAA GAAGATACCG GTTTATATCA AACAGAGGCC
TCGCTAAGCT GTTCGGGTGA AGATGATAAG ATCATACCTC TATGGTTATC TGAAAAACAT
ACAATAGAAG CTGCGATTAA ACAATGTGAT GGCAATGTGC CCAAGGCTGC GGCATTATTA
GATATCAGCG CTTCAACTAT CTATCGAAAA CGTCAAAGCT GGGAAGAGCA ACAAAAAGTA
ACCTCTTAG
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| Protein sequence | MEIDHSFTVL LVEDSMSLGA LYTEYLRAEG AKVTHVNHGE DALAEMERWQ PDLLVLDIKL
PDMSGMDILQ KVQSNYTDIT VIMITAHGTI DLAVESMKSG AFDFLVKPFD AKRLSITVRN
ALKQRQLVNL VAKYEQSLPK ANYKGFVGES LSMQAVYKTI DCVANSKASV FIVGESGTGK
EVCAHAIHHA GNRRDNAFVA LNCASIPKDL IESEIFGHTK GAFTGAVANR DGAASRADGG
TLFLDEICEM DLELQSKLLR FIQTGIFQKV GGTKEERVDV RFVSATNRIP WEEVKHGRFR
EDLFYRLHVI PIELPPLRMR GKDITLLANK LLKEYNNEEG KQFKSLSSDT KKILQSYDWP
GNVRQLQNII RQVVVLNSSD IVEASMLPPQ LTSTLSRTSL VQPLIGVQST AEDNRGLTDV
VSCLSSEDGK EDTGLYQTEA SLSCSGEDDK IIPLWLSEKH TIEAAIKQCD GNVPKAAALL
DISASTIYRK RQSWEEQQKV TS
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