| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1772 |
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| Symbol | |
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| ID | 6183963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1542659 |
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| End bp | 1543342 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641672270 |
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| Product | two component transcriptional regulator, Fis family |
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| Protein accession | YP_001798439 |
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| Protein GI | 171464326 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 0.979845 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAGTA TTTTGGTCGT TGATGACGAG ATGGGTATTC GTGAACTTCT CAATGAGATT
CTTACAGATG AAGGCCATAC TGTGTACGCT GCAGAAAGTG CAATACAGGC GCGTACCATT
CGCGAACAAA TGCGCCCCGA TCTGGTTTTG TTAGATATTT GGATGCCCGA TACGGATGGC
ATCACTTTAT TAAAAGAATG GTCAAACACT AGGCAACTTA CTATGCCGGT GGTCATGATG
TCAGGCCACG CTACGATTGA TACCGCAGTC GAAGCTACCC GGATTGGCGC GCTGAATTTT
TTAGAAAAGC CAATTGCATT GCAAAAGCTG TTGAAGACGG TGAGCAAGGC CTTAGAGAGC
TCGCCTAAAT ATGTAGAGCC AGAACAAGAG CGTGCAGTTC AGTCCACCAC CAGTGCAACG
GCAACACCAA AGCAGGCGGT CGTCGAATCC GCGCCTGCGC CAGCAGAGGG CAAATACATC
AGTGGAATCG CCAAAACCTA TTTTGATTTG CCCCTAAGAG AGGCTCGAGA CCTCTTTGAA
AAGGCATATT TTGAGCACCA AATGCAAATT ATGGGCGGCA GCATGACTAA GATTTCAGAG
TACACGGGCC TAGAGCGCAC CCATTTGTAT CGCAAGCTTA AGGCCCTGGG AATAGATACT
TCGCGCAATA AAGGCGAGGG CTAA
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| Protein sequence | MASILVVDDE MGIRELLNEI LTDEGHTVYA AESAIQARTI REQMRPDLVL LDIWMPDTDG
ITLLKEWSNT RQLTMPVVMM SGHATIDTAV EATRIGALNF LEKPIALQKL LKTVSKALES
SPKYVEPEQE RAVQSTTSAT ATPKQAVVES APAPAEGKYI SGIAKTYFDL PLREARDLFE
KAYFEHQMQI MGGSMTKISE YTGLERTHLY RKLKALGIDT SRNKGEG
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