| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1278 |
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| Symbol | |
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| ID | 6204836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 1584285 |
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| End bp | 1585643 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641690919 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001818163 |
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| Protein GI | 182413097 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.902353 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGC CGAAGGCAAG AATCCTGGTC GTGGACGACG AGCGCGCGCT CTGCGCGGGC
ATTCAGGAGG CGTTGCAGCG CGAGGGGCAT CAGGTCGACG CAGCCAACGA TGGCGCGAGC
GCGCTGCGGC TCCTGACGCA GAAGGCCTAC AACCTGGTCG TCACCGATAT TCGGATGCCA
GAGCTCGACG GCATGCAGCT GCTGAAAGCG GCGCGGGCGC GCGGCCGCGA CACGCAGTTC
ATCCTGATGA CCGCCTTTGG CCGCGTGGAA ACCGCGGTCG AGGCGATGCG CGCCGGCGCC
TACGACTACC TGACGAAACC GGTGGATCTG AAACGACTGC GCGCGGTGGT GGCCAAGGCG
CTCGAGCTGC AGACGGTCGT GGCGGAAAAC AGCGAACTGC GACAGCGGCT GCAGCGCGCC
GAGCCGGGGC TGCTGCTCGG CGAAAGCGAG CCGATGCGAA AAGTCGTCGC CATGGCCGAG
GAAGTGGCCC AGAGCGACGT GACGGTGCTG ATCGAAGGTG AGAGCGGCAC GGGCAAGGAG
CTCGTGGCGC GGCTGATTCA CACGCGAAGC GCGCGAGCGA AGAAACCGTT CATTTTCGTG
AACTGTGCCG CGCTCACGGA GTCGCTCGTC GAGGCCGAGC TGTTCGGCCA CGCGAAGGGA
TCGTTCACTG GCGCGGTGGC GGACAAGCTC GGGCGATTTC ACCTCGCGGA CGGCGGCACG
CTGTTTCTCG ACGAAATCGG CGACTTGGGC GCGAAAGGGC AGGGTGACCT GTTGCGCGTG
CTCGAGGATG GGGCCTTCCG GATGGTCGGC GGCACCGAGC TGCAGCGAGT GAACGTGCGC
GTGATCACCG CGACGAACAA GCGGCTGCAG GAGGCGGTGG CGGCGGGGAA GTTTCGCGAG
GATTTGTTCT ATCGGTTGCA GATCGTGCCG ATCACCGTGC CGCCGCTGCG GGAGCGTGCG
GAGGACATTC CGCTGCTGAT CGACGCGTTT CTCGAGCACT TCGTGCAGAA GCACAAACGG
CGCCGGCGCC GGCTGTCCAC CGAGGCGGTG CAGGTGTGCC GGCGGTTCCC CTGGCCGGGC
AACGTGCGGC AGCTGCGCAA CGTGATCGAA CGGCTGGTCG TGACCTCGCC CAACGCGGTG
GTCGGCGTGG AGGAGCTGCC GGACTTCCTC GTCGCGCACG ATCGCAGCAC GAATTTCTTC
ACGGTGCGCG TGGGCATGAC GCTCGCGGAA GCGGAAAAGC TGTTGATCCG GCAGACGCTC
TCGCAGCTCA CGTCGAATCG CGAGGAGGCG GCGCAGGCGC TCGGGATCAG CCGGCGCACG
CTCCAATACA AGCTGAAGCA ATACGGATTG CTGGAGTGA
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| Protein sequence | MSEPKARILV VDDERALCAG IQEALQREGH QVDAANDGAS ALRLLTQKAY NLVVTDIRMP
ELDGMQLLKA ARARGRDTQF ILMTAFGRVE TAVEAMRAGA YDYLTKPVDL KRLRAVVAKA
LELQTVVAEN SELRQRLQRA EPGLLLGESE PMRKVVAMAE EVAQSDVTVL IEGESGTGKE
LVARLIHTRS ARAKKPFIFV NCAALTESLV EAELFGHAKG SFTGAVADKL GRFHLADGGT
LFLDEIGDLG AKGQGDLLRV LEDGAFRMVG GTELQRVNVR VITATNKRLQ EAVAAGKFRE
DLFYRLQIVP ITVPPLRERA EDIPLLIDAF LEHFVQKHKR RRRRLSTEAV QVCRRFPWPG
NVRQLRNVIE RLVVTSPNAV VGVEELPDFL VAHDRSTNFF TVRVGMTLAE AEKLLIRQTL
SQLTSNREEA AQALGISRRT LQYKLKQYGL LE
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