Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1312 |
Symbol | |
ID | 4956058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 1403490 |
End bp | 1404857 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640180491 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_001112671 |
Protein GI | 134299175 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.502008 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCAAAA AGCGGGTTCT CGTAGTGGAT GATGAAGAAA GTGTAAGACA GTTTCTGTAT GACGTTTTGA CAGAGGAAAA ATACCAAGTG GCTACTGCAG CAAATGGCCT TCAGTGTCAG GATAAATTAA TGCAATTCAA GCCGGATGTC CTTATTACAG ATATACGAAT GCCTGAAAAA GATGGTTTTG GCTTGTTGGA ACAGATCAAA TCAGCCGGTT TAAATATACC TGTTATTCTA ATGACAGCCT TTGGTACCAC GGAAGTGGCG ATAAAAGCGA TGAAGCTGGG GGCCTTTGAT TATATTGTTA AGCCCTTTGA TTTAGATGAG TTTCTAGATC TTATCCAACG GGCAGTGGCC CAATCAGATA CGGTGGCTAC GTTTCCCCAG GCTCAAGAAC CAGCAAGTTC TACTGGCATT AATATAATCG GGAATTCTCC TAGTATGCGG AACGTGTATA AAGATATTGG GCGGGTAGCT GACAGTAACG CCACTGTTTT AATACAGGGA GAGAGCGGTA CAGGGAAGGA ATTGGTGGCC AGAGCCATCC ACTATAATAG TTCACGACGG AATAACCCCT TTATCAAAGT AAATTGTGCA AACTTACCTG ATAGTCTACT GGAAAGTGAG CTATTCGGTT ATGAAAAAGG AGCTTTTACC GGGGCCAGCT CTTTAAAGGT AGGGAGATTT GAGTTAGCCC ATGAGGGTAC TATTTTTTTT GATGAAATTG GTGAGATTAG TCTTGCAACT CAGGCAAAAC TACTTAGAGC AATTCAGGAA AAGGAATTTG ACCGGGTAGG CGGTACAAAA ACCATCAAGG TTAATGTTCG TATTCTGGCT GCCACCAATC GAAAACTCAA GCAAAGTGTT AGAGAAGGAG AGTTTCGAGA GGATTTGTTT TTTCGGTTAA ACGTAGTGAA TATTGAAATA CCTCCTTTGC GTGACAGAAA GGAAGATATT CCCTTACTAA TTGCTCACTT TCTTGCCAAA TATAACAAGG AATTTAACAA GGAAATTAAG GGTTTTTCAA AAGAAGCCAT TAAATTATTA ATTGGCTATG ATTGGCCAGG CAATGTTCGG GAACTGGAAA ATGTTGTTGA AAGATCAATC ATTATGGCTA GGGGAGCGAT CATTGTTCCG GAGGATATCC AACTGGGGGC AACGGTTTCA CAACAACCCA CTGAATTAGA AATCCTTGAT GAAAATTTAT CCCTAAAACA AATTATTTCG GATGTTGAGC GGAAGGTTAT TTTAAAAGCA CTGGAAGAGA ATAATTGGTG CCGTACCACT GTTGCAAAGG TTTTAAAAAT CAACAGAAGA TCCCTGTATG CAAAAATGAA AGAGCTAGGC ATTGAAGAAA ATGGGTAA
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Protein sequence | MVKKRVLVVD DEESVRQFLY DVLTEEKYQV ATAANGLQCQ DKLMQFKPDV LITDIRMPEK DGFGLLEQIK SAGLNIPVIL MTAFGTTEVA IKAMKLGAFD YIVKPFDLDE FLDLIQRAVA QSDTVATFPQ AQEPASSTGI NIIGNSPSMR NVYKDIGRVA DSNATVLIQG ESGTGKELVA RAIHYNSSRR NNPFIKVNCA NLPDSLLESE LFGYEKGAFT GASSLKVGRF ELAHEGTIFF DEIGEISLAT QAKLLRAIQE KEFDRVGGTK TIKVNVRILA ATNRKLKQSV REGEFREDLF FRLNVVNIEI PPLRDRKEDI PLLIAHFLAK YNKEFNKEIK GFSKEAIKLL IGYDWPGNVR ELENVVERSI IMARGAIIVP EDIQLGATVS QQPTELEILD ENLSLKQIIS DVERKVILKA LEENNWCRTT VAKVLKINRR SLYAKMKELG IEENG
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