Gene Dred_1312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1312 
Symbol 
ID4956058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1403490 
End bp1404857 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content40% 
IMG OID640180491 
Producttwo component, sigma54 specific, Fis family transcriptional regulator 
Protein accessionYP_001112671 
Protein GI134299175 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.502008 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCAAAA AGCGGGTTCT CGTAGTGGAT GATGAAGAAA GTGTAAGACA GTTTCTGTAT 
GACGTTTTGA CAGAGGAAAA ATACCAAGTG GCTACTGCAG CAAATGGCCT TCAGTGTCAG
GATAAATTAA TGCAATTCAA GCCGGATGTC CTTATTACAG ATATACGAAT GCCTGAAAAA
GATGGTTTTG GCTTGTTGGA ACAGATCAAA TCAGCCGGTT TAAATATACC TGTTATTCTA
ATGACAGCCT TTGGTACCAC GGAAGTGGCG ATAAAAGCGA TGAAGCTGGG GGCCTTTGAT
TATATTGTTA AGCCCTTTGA TTTAGATGAG TTTCTAGATC TTATCCAACG GGCAGTGGCC
CAATCAGATA CGGTGGCTAC GTTTCCCCAG GCTCAAGAAC CAGCAAGTTC TACTGGCATT
AATATAATCG GGAATTCTCC TAGTATGCGG AACGTGTATA AAGATATTGG GCGGGTAGCT
GACAGTAACG CCACTGTTTT AATACAGGGA GAGAGCGGTA CAGGGAAGGA ATTGGTGGCC
AGAGCCATCC ACTATAATAG TTCACGACGG AATAACCCCT TTATCAAAGT AAATTGTGCA
AACTTACCTG ATAGTCTACT GGAAAGTGAG CTATTCGGTT ATGAAAAAGG AGCTTTTACC
GGGGCCAGCT CTTTAAAGGT AGGGAGATTT GAGTTAGCCC ATGAGGGTAC TATTTTTTTT
GATGAAATTG GTGAGATTAG TCTTGCAACT CAGGCAAAAC TACTTAGAGC AATTCAGGAA
AAGGAATTTG ACCGGGTAGG CGGTACAAAA ACCATCAAGG TTAATGTTCG TATTCTGGCT
GCCACCAATC GAAAACTCAA GCAAAGTGTT AGAGAAGGAG AGTTTCGAGA GGATTTGTTT
TTTCGGTTAA ACGTAGTGAA TATTGAAATA CCTCCTTTGC GTGACAGAAA GGAAGATATT
CCCTTACTAA TTGCTCACTT TCTTGCCAAA TATAACAAGG AATTTAACAA GGAAATTAAG
GGTTTTTCAA AAGAAGCCAT TAAATTATTA ATTGGCTATG ATTGGCCAGG CAATGTTCGG
GAACTGGAAA ATGTTGTTGA AAGATCAATC ATTATGGCTA GGGGAGCGAT CATTGTTCCG
GAGGATATCC AACTGGGGGC AACGGTTTCA CAACAACCCA CTGAATTAGA AATCCTTGAT
GAAAATTTAT CCCTAAAACA AATTATTTCG GATGTTGAGC GGAAGGTTAT TTTAAAAGCA
CTGGAAGAGA ATAATTGGTG CCGTACCACT GTTGCAAAGG TTTTAAAAAT CAACAGAAGA
TCCCTGTATG CAAAAATGAA AGAGCTAGGC ATTGAAGAAA ATGGGTAA
 
Protein sequence
MVKKRVLVVD DEESVRQFLY DVLTEEKYQV ATAANGLQCQ DKLMQFKPDV LITDIRMPEK 
DGFGLLEQIK SAGLNIPVIL MTAFGTTEVA IKAMKLGAFD YIVKPFDLDE FLDLIQRAVA
QSDTVATFPQ AQEPASSTGI NIIGNSPSMR NVYKDIGRVA DSNATVLIQG ESGTGKELVA
RAIHYNSSRR NNPFIKVNCA NLPDSLLESE LFGYEKGAFT GASSLKVGRF ELAHEGTIFF
DEIGEISLAT QAKLLRAIQE KEFDRVGGTK TIKVNVRILA ATNRKLKQSV REGEFREDLF
FRLNVVNIEI PPLRDRKEDI PLLIAHFLAK YNKEFNKEIK GFSKEAIKLL IGYDWPGNVR
ELENVVERSI IMARGAIIVP EDIQLGATVS QQPTELEILD ENLSLKQIIS DVERKVILKA
LEENNWCRTT VAKVLKINRR SLYAKMKELG IEENG