| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6438 |
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| Symbol | |
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| ID | 8362622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8090399 |
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| End bp | 8091583 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644968566 |
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| Product | putative two component, sigma54 specific, transcriptional regulator, Fis family |
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| Protein accession | YP_003126043 |
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| Protein GI | 256425390 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00615091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.383003 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGCA TTCTGATAAT TGATGATGAG AAAAGCATAC GTAAAACGCT ATCCGAAATC
CTGAGTTATG AAGGATACAA AGTAGAGGAA GCAGCAGATG GTGCTGAAGG CTTCAAATTG
TTCAAGGATA AGCAGTACGA CGCCGTACTC TGTGATATAA AAATGCCCAA AATGGACGGG
CTGGAATTCC TGGAAAAAGC CAGGGAAATC AATACGGATG TGCCCATTAT CATGGTATCA
GGTCACGGCA ATATCGATAC GGCCGTAGAA GCAGTTAAAA AAGGCGCATA CGACTATATC
TCCAAACCGC CGGATCTTAA CAGGTTGCTG ATTACCCTGC GTAACGCCAT GGATAAGACC
AACCTGGTGA CAGAAACCAA GACCCTGCGC CGGAAAGTGA ACAAAACCCA GGAAATGATC
GGGACCTCAG CGCCCATCCT GAAAATAAAA GAAACGATTG AAAAGGTGGC GCCAACTGAT
GCCCGCGTAC TGGTAACCGG TGAAAACGGG GTAGGTAAGG AACTGGTAGC CCGCTGGCTT
CATGAGCTGA GCAACCGTGC TTCCGGCCCT ATCGTGGAAG TGAACTGTGC GGCTATCCCG
AGCGAACTTA TTGAAAGCGA ACTCTTTGGT CATGAAAAAG GTTCCTTTAC ATCTGCTGTA
AAACAGCGTA TCGGTAAATT TGAACAGGCG AATGGTGGTA CACTGTTCCT GGACGAGATT
GGCGATATGA GCCTCAGCGC ACAGGCGAAA GTACTGAGAG CCCTGCAGGA AGGTAAGATC
ACCCGTGTAG GTGGCGACAA AGAGATCAGT GTTGATGTGC GTGTGGTAGC GGCGACCAAT
AAAGACCTGC TGAAGGAAGT GGAAGACAAA AACTTCCGTC TGGATCTTTA CCATCGCCTT
AGTGTGATCC TGATCCATGT ACCGTCCCTG AATGATCGTC GGGAAGATAT TCCTGCACTG
GTAGAACATT TTCTTGACAG CGCCTGCCAG GAGTATGGTA TGGCCAGGAA ATCGATCGAT
AAGGAAGCCA TGAAGGCTTT GCAGCAACAT AACTGGTCCG GAAATATCCG TGAACTGGGT
AACGTGGTAG CCCGACTGGT AATCCTTTCC GGGAAAACGA TTACACCTGA AGATGTGTTT
GACTACGTAT TGCCGGCGAG AGACAAGAAG AAAGTAAACG CATAA
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| Protein sequence | MASILIIDDE KSIRKTLSEI LSYEGYKVEE AADGAEGFKL FKDKQYDAVL CDIKMPKMDG
LEFLEKAREI NTDVPIIMVS GHGNIDTAVE AVKKGAYDYI SKPPDLNRLL ITLRNAMDKT
NLVTETKTLR RKVNKTQEMI GTSAPILKIK ETIEKVAPTD ARVLVTGENG VGKELVARWL
HELSNRASGP IVEVNCAAIP SELIESELFG HEKGSFTSAV KQRIGKFEQA NGGTLFLDEI
GDMSLSAQAK VLRALQEGKI TRVGGDKEIS VDVRVVAATN KDLLKEVEDK NFRLDLYHRL
SVILIHVPSL NDRREDIPAL VEHFLDSACQ EYGMARKSID KEAMKALQQH NWSGNIRELG
NVVARLVILS GKTITPEDVF DYVLPARDKK KVNA
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