Gene Gmet_0555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_0555 
Symbol 
ID3738389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp592626 
End bp593999 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content59% 
IMG OID637777829 
Producttwo component, sigma54 specific, Fis family transcriptional regulator 
Protein accessionYP_383523 
Protein GI78221776 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGAAAGA CGAAGATTCT GGTTGTCGAC GACGAGCACC TTATCCGCTG GTCCCTGGAG 
CAGAATCTGA AAAAACAGGG ATACGAGGTG GTTTCGGCCG GCAACGGCGA GGATGCCCTG
CGGCTCGTCC GGGATGAACA ACCGGACCTG GTGCTGCTCG ATATCCAGCT CCCCGGCATC
AGTGGCCTGG ATGTCCTGGA GAAGATCAAG GAGCACGACG AGGAGATCAT CGTGATCATG
GTCACGGCCC ACGGAGCGCT GGAGACGGCG GTTCATGCCA TGCGGCTCGG GGCCTTCGAC
TATATCAACA AGCCCTTTAA CCTGGACGAG ATGGCCATCG TCATCCGCAA GGCCCTGGAA
ACCTCCGATC TCCGGCGGGA GGTCCAGCGG CTGCGGGGTG AGCAGGCGAA GAAGTTCGGT
ACGCCCGATA TCATCGGAGC GAGCCGCCAC ATGAAGAACG TCCTCGACAT GATGGAGAAG
GTGGCCAAGA GCGACGCCTC CACTGTCCTC GTTCAGGGAG AGTCGGGGAC CGGCAAGGAG
CTGGTCGCCA AGTGGATCCA CTATAAATCC GCCCGGGCCG AACGCCCCTT TGTCGCCATA
AACTGCGCTG CTGTCCCGGC GACACTCCTC GAAAGCGAGC TCTTCGGTCA TGAAAAAGGG
GCCTTCACCG ACGCCAAGGC GATGAAAAAG GGGCTTTTCG AGCTGGCCGA CGGTGGCACG
GTCTTTCTTG ACGAGATCGG CGACATGGAG TTGGGGATGC AGGCGAAGCT CCTCCGCTTC
CTGGAGGAAC GGACCTTCCG CCGCATCGGC GGCACCAAGT CGTTTTCCGT CGATGTCCGG
ATCATCTCCG CCACCAACCG CGACCTCATC AAGGCGATCG AGGAAAAGAG CTTCCGCAAC
GATCTCTACT ATCGCCTCCA GGTGATCCCC ATCTATCTCC CCCCCCTGCG GGAGCGGCGG
GAAGACATCC TCACCCTGAC CAGCCATTTC ATCGAGCTGT TCAACGCCGA GTTCAACAAG
CATGTCACCG GCATCTCCAA GATGGCGGAG AAACTCTTGC TCGACTACAC CTGGCCCGGC
AATATCCGCG AATTGAAGAA CGTCATCGAG CGCGCCATCA TTCTCGGCAA TGACGAGACG
CTCCTCCTTG AGCACCTGCC GCTGGAAATC GTCGCCAAGG CCTCCTCCCA GTCCGTGGGG
CTCACCACCT TCAAGCTTCC CCCCGAGGGG ATAGACATTG AAGAGGTGGA AAAGGAGCTT
ATCCGCCAGG CCCTGGAGAT CTCGGACTGG AACCAGTCCA AGGCGGCCAG GAAGCTTAAT
CTCGGCATTG ACGCCTTCCG TTACCGGATG AAGAAATTCG GGTATTTGAA GTAG
 
Protein sequence
MRKTKILVVD DEHLIRWSLE QNLKKQGYEV VSAGNGEDAL RLVRDEQPDL VLLDIQLPGI 
SGLDVLEKIK EHDEEIIVIM VTAHGALETA VHAMRLGAFD YINKPFNLDE MAIVIRKALE
TSDLRREVQR LRGEQAKKFG TPDIIGASRH MKNVLDMMEK VAKSDASTVL VQGESGTGKE
LVAKWIHYKS ARAERPFVAI NCAAVPATLL ESELFGHEKG AFTDAKAMKK GLFELADGGT
VFLDEIGDME LGMQAKLLRF LEERTFRRIG GTKSFSVDVR IISATNRDLI KAIEEKSFRN
DLYYRLQVIP IYLPPLRERR EDILTLTSHF IELFNAEFNK HVTGISKMAE KLLLDYTWPG
NIRELKNVIE RAIILGNDET LLLEHLPLEI VAKASSQSVG LTTFKLPPEG IDIEEVEKEL
IRQALEISDW NQSKAARKLN LGIDAFRYRM KKFGYLK