| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0827 |
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| Symbol | |
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| ID | 3969862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 909676 |
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| End bp | 911058 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637923943 |
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| Product | acetoacetate metabolism regulatory protein AtoC |
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| Protein accession | YP_530716 |
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| Protein GI | 90422346 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.158461 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCCCG CGCGGGTGGT TCTCATCGTC GACGATGACG AGGCGATCCG TCACATGCTT
GCCGCCGTGC TCGGCAAGGA GGGCATCACC GTGATCGCCG CGGCGGATGG CGCGGAAGCC
GTGACGCTGT TCGGACTACA TCGGATGCCG GTGGTGCTGA TGGACATCCG GATGCCCCGG
ATGTCGGGCA TGCAGGCGCT TGCCGAGATC CGCAAGCTCG ACCGATCGGC GGCCGTGATC
CTGATGACCG CGTTCGCCGA GGTCGAGACC GCGGTCCGCG CGATCAAAGA GGGCGCATTC
GATTACATCA TCAAGCCGTT CGACATCGCG GAGCTCAAGC TGCTAGTCGG GCGCGCGCTG
CAGATGCGCG GACTGCGCGA CGACAATGCG GCGCTGCATC GCGCGCTGTC GGCGAGTTAT
CGCACGCACC GCATCCTGAC GGCGAGCCCG CGGATGACCG AACTTCTGCA GACCATCGCC
AAGGTGGCCA AGAGCCAGGC CACCGTGCTG GTCACCGGCG AGAGCGGCAC CGGCAAGGAA
CTCGTCGCCG GCGCGATCCA TTATAGCAGC CAGCGCGCCG CGGGGCCGTT GGTGAAAGTC
AATTGTGCGG CGATCCCGGA CGGTCTGCTC GAAAGCGAGT TTTTCGGGCA CGAGAAGGGG
GCCTTCACCG GCGCCATGGC GCGCCGCCGC GGGCGCTTCG AGCAAGCCGA ACACGGCACC
CTGTTCCTTG ACGAGATCGG CGATATCTCA CCGGCTCTGC AAGTCAAGCT GCTGCGCGTG
CTGCAGGAGC GCACATTCGA GCGGGTCGGC GCGGGTGAAC CGATCCACAC GGATGTGCGC
ATCGTGGCGG CGACCAATCG CGACCTCGAG GCGCTGGTTC GCCAGGGCCA GTTCCGAGAG
GATCTCTATT TCCGTCTCAA TGTCGTGCCG CTGGTGACCG TTCCGTTGCG GGAGCGGCCG
GAGGATGTGC AACTGCTGGC CAACCATTTC CTGCAGCATT ACGCGGCCGA GAACCAGATC
GAGGTCGCGG GCTTTGATGA CCTGGCGATG GAATGCATGC TGCGCTATCC GTGGCCGGGC
AATGTCCGCG AATTGTCCAA CGCGATCGAG CGGGCGGTCG TGATGAGCAC CGGCCACATC
ATCTTCGTTG AGGATTTGCC GCACCGCATC AGCGCGCCGG GCCCATCGGC CGCGCCGCCC
TCGCCGAGCG AAGCGTCCGC GGAAGCCGAC CGCGGGCTGC GCGAACTGGT GATGCAGTAC
GAGGCCCGGG TCATTGCCGA GGCTTTGGAG CGCAACGGCG GCAATCGCGT TCGCACCGCG
CAAGAGCTTG GCATCAGCCG CCGCTCGCTG CTCTACAAGT TGCAGGATTA CGGAATCGAG
TGA
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| Protein sequence | MAPARVVLIV DDDEAIRHML AAVLGKEGIT VIAAADGAEA VTLFGLHRMP VVLMDIRMPR
MSGMQALAEI RKLDRSAAVI LMTAFAEVET AVRAIKEGAF DYIIKPFDIA ELKLLVGRAL
QMRGLRDDNA ALHRALSASY RTHRILTASP RMTELLQTIA KVAKSQATVL VTGESGTGKE
LVAGAIHYSS QRAAGPLVKV NCAAIPDGLL ESEFFGHEKG AFTGAMARRR GRFEQAEHGT
LFLDEIGDIS PALQVKLLRV LQERTFERVG AGEPIHTDVR IVAATNRDLE ALVRQGQFRE
DLYFRLNVVP LVTVPLRERP EDVQLLANHF LQHYAAENQI EVAGFDDLAM ECMLRYPWPG
NVRELSNAIE RAVVMSTGHI IFVEDLPHRI SAPGPSAAPP SPSEASAEAD RGLRELVMQY
EARVIAEALE RNGGNRVRTA QELGISRRSL LYKLQDYGIE
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