Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_3715 |
Symbol | |
ID | 3758702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 3674500 |
End bp | 3676461 |
Gene Length | 1962 bp |
Protein Length | 653 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637784637 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_390203 |
Protein GI | 78358754 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCATT CCATCCTGCT GGTAGATGAC GAGGAAGGTA TACGCACCGT CCTCGGGCTT TCGCTGGCCG ATGCCGGGTA CAATGTATCC GTGGCCGCCA CCGGAGAAGA GGCCCTGCGA CTGTTCGACC AGTCGCGTCC GGACATCATT CTTACAGATA TCAAGATGCC CGGACTTTCC GGTCTTGATC TGCTCAAACG CGTCAAAAAC ATCGCCCCCG ATGTGGAAGT CATCATGATC ACCGGCCATG GTGACATGCA GCTGGCCATC CAGAGCCTGA AACAGGACGC CACGGACTTC ATCACCAAAC CCATCAACGA CGACGTGCTG GAAATTGCCC TGAACAGGGC TCATGAACGC ATCTCCATGC GCAACCAGCT GCGCGAATAC ACTGAAAACC TGGAAAACAA AGTACGCGAG CAGTCCGCAC GACTGGTGGA GGCCGAACGG CAGCTGGCCG CCCAGCAGAT GATGGACGGG TTTTCCGTGG GTCTCAAAGC GCTGCTTAAC GCCATGGACA GCACGCTGGG CGGCGTGTTC AACGAACTGC CCTGCTTTGT GGCTGTGCAC AGCCGCTATC TGGAAATCAT CGCCGCAAAC GATCTGTACA GAGAAAAACT GGGCAATCTG GTGGGCCACC AGAGCTGGGA AGCCTACTAC GGGCGGGATA AAGACAGTAA CGGCTGCCCC GTGCTGACCG CCATACGCGA AGGACGCGGC AGCCGCACCG AAGAAATGCT GGTGGACAAG ACCGGCAAAG GTATTCCCGT GCTGGTGCAC ACCGCCCCCA TTCTCGACAA TGACGGCGAA GTGGAACTGG TGCTGGAAAT TTCGGTCGAT ACATCTGAAG CACGCCGGCT GCACGAAGAA CTGCGCCTTA CCCGCCACCG CTACGGCCAG CTTTTCGACG AAGCCCCCTG CTACATCACC GTTCAGGACA AACAGTTCAG AGTGGTGGAG GCCAACCGCA GGTTCCGTGA AGATTTCGGA GACGCCGTGG GAGGTTTCTG CCACGAAGTA TTTGTACACC GCCAGACGCC CTGTACCGGC TGCCCAGTGC AACGCACCTT TAACGACGGC CAGCCGCATC AGTATGAAAC CGTGGTCACG TCACGCTCCG GCGAGCAGTA CAACGTGCTT GTCTGGACGG CCCCCCTGCG CGATGCCGCA GGCAACATCA CGGAAGTGAT GGAAATGTCG ACCAACATCA CGGAGCTGCG CAAGCTGCAG GACAGACTTT CCAACCTCGG CCTGCTGCTC GGTTCAACCG CACACGGCAT CAAAGGGCTG CTTACCGCTC TGGACGGGGG CATATACAGG CTTGGTTCCG GGCTGGAACG CAACAATACC GAGCGGGTAC ACGACAGCTA CGAAGATATC AGACACCTGA CAGACCGGCT GCGCAAAATG GTGCTCGACC TGCTGTACTA TGCAAAAAAA CGTGAGCTGA ACTGGGAAGT CGTTCTGGCT TCGCATTTTG CTCCTGAAGT GGCCGCACTT GTCAGACCCA AGGCTGAAGC GCAGAAAGTA CGCTTTACCA TCGAAGTTGC TCCCGATGCA GGAACATTTG AAGCCGATGC CGGCGCACTT TCCTCCGCAT TTGTAAACCT GCTGGAAAAT GCCGTGGAAG CCTGTACGGC AGACCGGACT CCGGACAAAA AACATGCAGT ACACATGGCC GTCAGCGGCC TGCCGGATAG GGTGGAATTC TGTATCACCG ACAACGGGGT GGGCATGGAC AGAGAAACGC GCGAAAAGCT GTTCACGCTC TTCTTCTCCT CCAAAGGTGC CGCAGGTACC GGCATAGGCC TTTTCGTGGC ATCACAGACC GTACAGCAGC ACGGGGGCTC CATCTCCGTG GGGTCCGAAC CGGGCAAAGG TACAACCTTT GTCATCACAC TGCCCCGCAC GCTGCCGGAT TCCGCCAAGT CAGAACCCCG TCATCCGGCA CCCGCCACCT AG
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Protein sequence | MSHSILLVDD EEGIRTVLGL SLADAGYNVS VAATGEEALR LFDQSRPDII LTDIKMPGLS GLDLLKRVKN IAPDVEVIMI TGHGDMQLAI QSLKQDATDF ITKPINDDVL EIALNRAHER ISMRNQLREY TENLENKVRE QSARLVEAER QLAAQQMMDG FSVGLKALLN AMDSTLGGVF NELPCFVAVH SRYLEIIAAN DLYREKLGNL VGHQSWEAYY GRDKDSNGCP VLTAIREGRG SRTEEMLVDK TGKGIPVLVH TAPILDNDGE VELVLEISVD TSEARRLHEE LRLTRHRYGQ LFDEAPCYIT VQDKQFRVVE ANRRFREDFG DAVGGFCHEV FVHRQTPCTG CPVQRTFNDG QPHQYETVVT SRSGEQYNVL VWTAPLRDAA GNITEVMEMS TNITELRKLQ DRLSNLGLLL GSTAHGIKGL LTALDGGIYR LGSGLERNNT ERVHDSYEDI RHLTDRLRKM VLDLLYYAKK RELNWEVVLA SHFAPEVAAL VRPKAEAQKV RFTIEVAPDA GTFEADAGAL SSAFVNLLEN AVEACTADRT PDKKHAVHMA VSGLPDRVEF CITDNGVGMD RETREKLFTL FFSSKGAAGT GIGLFVASQT VQQHGGSISV GSEPGKGTTF VITLPRTLPD SAKSEPRHPA PAT
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