| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1320 |
|---|
| Symbol | |
|---|
| ID | 2686471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | + |
|---|
| Start bp | 1446088 |
|---|
| End bp | 1447470 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637125994 |
|---|
| Product | sigma-54 dependent DNA-binding response regulator |
|---|
| Protein accession | NP_952373 |
|---|
| Protein GI | 39996422 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAAG AGCGGCAACC TGCCCGGGTG CTGATCGTCG ACGATGACGT ATCGCTGCGC
CGGGTACTCG AATACAACCT CCAGGAGGAG GGGTACGACG TGATCACGGC GGGCAGCGGC
GAGGAGGGGC TGCGCCTGTT CGATGAGCGT TCGCCGGCCC TGGTGGTCAC CGACCTGAAA
ATGCCCGGCA TGGGGGGATT CCGGCTCCTG CAGGAAATCA AGGGACGTTC GCCCGACACG
GCGGTCATCG TGATCACCGC CTTTGGTGCC GTGGAGACGG CGGTCGACGC CATGAAAGCC
GGGGCCTACG ACTACATCAC CAAGCCCTTC AACCGTGATG CCTTGAAGCT GACGGTGAAA
AAGGCCCTGG AGATGCTCGG GCTTTCCCGG GAAAACCGCC GCCTGCGGGA GGCTCTCACG
GAGCGGGAGG ATTACCGGAG TATCGTGGGC ATCTCCCGCC GGATGGAGGA GGTCTTCCGG
GTCGTGGACC GGGTGGCCGA CACGGACGCT ACGGTCCTCA TCACCGGCGA ATCCGGCACC
GGCAAGGAAC TGGTGGCCCG TGCCGTGCAC ACCCGCAGCT CACGGAGAGC AGCCCCCTTC
GTGGCGGTCA ACTGCGCGGC CATCCCCCGC GATTTGCTTG AGAGCGAGCT GTTCGGCCAC
GTCAAGGGTT CCTTCACCGG CGCTGTGCGC GACAAGGCGG GAAAATTCCA GCAGGCCGAG
GGAGGGACCC TCTTCCTCGA CGAAGTGGGC GAGTTGCCCG TTGAACTCCA GTCGAAGCTC
CTGCGGGCGC TCCAGGAAAA GGAGGTTCAG CAGGTGGGGG GCACCGAGGT CCGGAAGCTG
GACGTCCGGG TGGTGGCCGC CACCAACGCC GATCTGGAGC AGGCCATCGA GGAGGGCCGC
TTCCGCGAGG ACCTCTACTA CCGCCTCTCG GTCATACCGA TTCACCTGCC GCCGCTGCGG
GAGCGGAAAG AAGACATCCC CCTGCTGGTG CGCCACTTTG CTGCGCGGCA CGGCGGCGAT
CGGGTAGCCT TTGCCCCGGA GACCCTGGAG GTCATGGCTG ACTATGGCTG GCCGGGCAAC
GTCCGGGAGT TGGAAAATAC CGTGGAGCGG CTCCTCATCA TGCGCTGCAG CGACACTATC
ACCCCGGCGG ACCTTCCCGA CAAGGTACGC AGCCGCCGCG CACCGTCGAC GGAATGTCCC
GTTATCAGCC TACCCGACGA GGGATACTCC CTTGAGCAAC TGGAGCGGGA AATCGTGGTG
GAAGCCCTGG AACGGAACAA CTGGAATCAG AGTTCGGCGG CGCGCTTTCT TCGCATTCCG
CGCCATACAC TCATCTACAG GATGGAGAAG TATCAGATCA CTGCACCGGA GAGAAAAAAA
TGA
|
|---|
| Protein sequence | MAEERQPARV LIVDDDVSLR RVLEYNLQEE GYDVITAGSG EEGLRLFDER SPALVVTDLK
MPGMGGFRLL QEIKGRSPDT AVIVITAFGA VETAVDAMKA GAYDYITKPF NRDALKLTVK
KALEMLGLSR ENRRLREALT EREDYRSIVG ISRRMEEVFR VVDRVADTDA TVLITGESGT
GKELVARAVH TRSSRRAAPF VAVNCAAIPR DLLESELFGH VKGSFTGAVR DKAGKFQQAE
GGTLFLDEVG ELPVELQSKL LRALQEKEVQ QVGGTEVRKL DVRVVAATNA DLEQAIEEGR
FREDLYYRLS VIPIHLPPLR ERKEDIPLLV RHFAARHGGD RVAFAPETLE VMADYGWPGN
VRELENTVER LLIMRCSDTI TPADLPDKVR SRRAPSTECP VISLPDEGYS LEQLEREIVV
EALERNNWNQ SSAARFLRIP RHTLIYRMEK YQITAPERKK
|
|---|
| |