Gene Mpal_1858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1858 
Symbol 
ID7272675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1972680 
End bp1973042 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content50% 
IMG OID643570473 
Productresponse regulator receiver protein 
Protein accessionYP_002466886 
Protein GI219852454 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACGCA TATTAATTGT CGATGATACA ATGTTCATGC GGACGCTTCT CAAGAATATC 
CTCTTCTCAG GCGGCCATAC TATCGTGGGC GAGGCGGCCG ATGGGGAAGA GGGGATTGCG
AAGTATAAGG AGCTGAAACC TGACCTCGTC ACCATGGATG TGGTGATGCC AAAGTTGAAT
GGTATCGAGT CACTGAAAGG TATCAAACAG TTCGATCCGG CAGCCAGGGT GGTCATGTGT
ACTGCAGTTG GGCAGGAACA GATGGTGAAA CTCGCAATCA AGACAGGGGC GAAAGGGTAT
ATTGTCAAAC CGTTCCAGGC CCCAAAGGTA CTTGAAGAAG TGAAGAACGT CCTGGCGTCA
TGA
 
Protein sequence
MGRILIVDDT MFMRTLLKNI LFSGGHTIVG EAADGEEGIA KYKELKPDLV TMDVVMPKLN 
GIESLKGIKQ FDPAARVVMC TAVGQEQMVK LAIKTGAKGY IVKPFQAPKV LEEVKNVLAS