Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0516 |
Symbol | |
ID | 5693338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 581241 |
End bp | 582647 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641263100 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_001528403 |
Protein GI | 158520533 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000971097 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGGCG CCAAGGCCAA CATACTGGTG GTGGACGATG AACTGAGCAT GCGGGAGCTT CTGGATGTGA TGCTTTCCCG TGAGGGATAC AAGGTGGCCT GCGCCGAGGA CGGCACCCAG GCCCTTTCCA TGCTGGGGGA GATGAAATTC GATCTGGTGC TGTGTGATGT GCGGCTGGGC GACATGTCGG GCATTGATGT GCTCAAAGCG GCCAAAAAGG CCAATCACGA CACCGTTGTG ATCATGATCT CCGCCTATGC CACCACCGAG GTGGCGGTGG CGGCCATGAA TGAGGGGGCC TATGACTTTG TGCCCAAGCC CCTGGACAGT GCCGAGCTGA AGCAGACCAT TATCCGTTCC CTGTCCCTGC GCACAGTGGA GCAGGAGCGC CAGGCCCTGG ACAACAGCCT GGAGGACCAC CTCTATTTCG AACGCATTGT CGGCAGCCAT CCCAAGATGA AGCATATCTA CAACATGGTC CGGCAGGTGG CCCAGACCAG GACCCGGATT CTGATCACCG GAGAGAGCGG CACCGGAAAA GAGCTGATCG CCCGGGCCAT TCACGAGCAG AGCGACAGGG CGAACCACCC CTTTGTGGTG GTCAACTGCG GCGGTATTCC GGAAAACCTG ATGGAGAGCG AGCTGTTCGG TCACAGGAAA GGATCGTTTA CCGGTGCTGT CATGGACAAG AAGGGGCTTT TCACCATTGC GCACAAGGGC ACCATCTTTC TTGACGAAAT CGGCGAGCTG AGCATGCCCC TGCAGGTCAA GCTGCTGCGG GTGGTCCAGG ACGGGGCCTT CAAACAGGTG GGGGGAACAG AAGAGATATC CGTGGATGCC AGAATTCTTT CGGCCACCAA CAAAAATCTC TCCCAGGAGG TGATTGACGG CAATTTCCGG GAGGACCTGT TTTACCGGCT CAATGTGATT GAGTTGAACG TGCCCCCCCT TCGTGAGCGC AAGAGCGATA TTCGGGTGCT GGCCCAGTTT TTTGTGGAAA AATTTTCAAA AGACCTGGGC AAGGAGGTGA TTAAGCTCTC CTCCTATGCC CTGGACATGC TGGAAAAATA CAGTTTTCCC GGCAATGTGC GGGAGCTTGA GAACCTGATA GAACGCAGCG TGGCCCTTTC CACCACCAAT ATCATTCTGC CGGAAAGCCT CTCCCTGGCC GTGCACAAGC GGCGCTGGAT CGAGGGGGTG CCGGGCCGGC GGTTCGACCT GGAGGAGGTG ACCAAGGGGG TGGCGCTGGA TGAGATTCTG GCTGACATTG AGCGGGCCTA TCTTAAAAAG GCCCTGGAGA GCAGCGGGGG CAACAAGAAC CGGGCTGCCG AACTGCTGGG CATCAGCTTT CGCTCTTTTC GGTACCGGTT GGACAAGCTG AATGTGCCGT GGGACGAAGA AGAATAG
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Protein sequence | MAGAKANILV VDDELSMREL LDVMLSREGY KVACAEDGTQ ALSMLGEMKF DLVLCDVRLG DMSGIDVLKA AKKANHDTVV IMISAYATTE VAVAAMNEGA YDFVPKPLDS AELKQTIIRS LSLRTVEQER QALDNSLEDH LYFERIVGSH PKMKHIYNMV RQVAQTRTRI LITGESGTGK ELIARAIHEQ SDRANHPFVV VNCGGIPENL MESELFGHRK GSFTGAVMDK KGLFTIAHKG TIFLDEIGEL SMPLQVKLLR VVQDGAFKQV GGTEEISVDA RILSATNKNL SQEVIDGNFR EDLFYRLNVI ELNVPPLRER KSDIRVLAQF FVEKFSKDLG KEVIKLSSYA LDMLEKYSFP GNVRELENLI ERSVALSTTN IILPESLSLA VHKRRWIEGV PGRRFDLEEV TKGVALDEIL ADIERAYLKK ALESSGGNKN RAAELLGISF RSFRYRLDKL NVPWDEEE
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