Gene Cagg_2051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2051 
Symbol 
ID7269210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2512013 
End bp2512756 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content55% 
IMG OID643566886 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002463375 
Protein GI219848942 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.520505 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAT TAAAAGACAA ACTTGTCCTC GTCGTTGATG ACGAGCCGCG CATGATCGCC 
TTCATGCGCA TGAATTTAGA ACTCGAGGGG ATGCGGGTGA CTACTGCCAC CAATGGCCGT
GAGGCCGTCG AGAAGGTGCG CGAGGAGATG CCCGACATCG TTTTGCTCGA CGTGATGATG
CCGGTGATGG ACGGGTTCGA GGCACTTCGC CGCATCCGTA GCTTCTCGCA AGTACCGGTG
ATCATTCTCA CGGCAAAAGA TGAGGAAGAG GATCGGGTGC GTGGCCTTGA ACTTGGGGCT
GACGATTACG TCGGCAAACC GTTTAGCCAA CGTGAACTGA TCAGTCGCAT CCGAGCCGTC
TTACGCCGTC ACTACACCCA ACCGCCCATC CCACAAACGC TGGTCAAGGT CGACGACCGG
CTCAGCATCG ATTTCGCCCG CCGTGAAGTG TTGGTTGACG GGAAGCGGGT CAATCTGCGC
CCCACCGAAT ATCGCTTGCT GTACCATCTG GTGCAGAACG CCGGTTATGT GTTAACCCAC
GAGATGTTGC TGAGCAAAGT GTGGGGGCCA GAATATCGTG ACGAAAGCCA TTATCTGCGT
TTGTACATTA CGTATCTGCG CCAAAAGATT GAAGAAGACC CTTCCAATCC GCGTTACATT
TTGACCGAAC GTGGGGTAGG GTATCGGTTT GTTGACTTTC CCGGCGCACG CCGGCTCAAT
ACGACCGAAA CACCGGTGGT CTGA
 
Protein sequence
MSELKDKLVL VVDDEPRMIA FMRMNLELEG MRVTTATNGR EAVEKVREEM PDIVLLDVMM 
PVMDGFEALR RIRSFSQVPV IILTAKDEEE DRVRGLELGA DDYVGKPFSQ RELISRIRAV
LRRHYTQPPI PQTLVKVDDR LSIDFARREV LVDGKRVNLR PTEYRLLYHL VQNAGYVLTH
EMLLSKVWGP EYRDESHYLR LYITYLRQKI EEDPSNPRYI LTERGVGYRF VDFPGARRLN
TTETPVV