Gene Dtpsy_2897 details

Gene Information

• Locus tag: Dtpsy_2897
• ID: 7384082
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: -
• Start bp: 3078457
• End bp: 3084537
• Gene Length: 6081 bp
• Protein Length: 2026 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 643656207
• Product: CheA signal transduction histidine kinase
• Protein accession: YP_002554331
• Protein GI: 222112067
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0643] Chemotaxis protein histidine kinase and related kinases

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.855039
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCATCTG TTGACGCCGC AAACGCACAG GGCGCCGATT GGGCCCAGGG CGAGCAGGAT 
CTTGGGCCGC TCGCATGGGT GCTCGATGAA CTGCGCAAAT CCTTGGATGG TGCCGTCAAG 
GCCATGCGCC GTTTCGTGCG CGATGCCGAG ATAGCGCGGG AGTCCGATCT CGCCTCACTG 
GACGCGGGGC CTTTGCGCAT CGCACGCCAG CAACTCCACC AGGCCAGCGG CGCGCTGGAG 
ATGGTGGGCA TGGCGCCTCC GGCCCTGGTG TTGCGCGCCA TGGAAACTGC GGTCCAGCGG 
TTCGTTCAGC GGCCGGAGAC CTGCAGCGAT GATGCAGCGG CCGTCATCGA GCGCGCCAGC 
TTTGCCTTGA TCGAATACCT GGAGCATGTG CTCGCAGGCA AGTCCGTGTC GCCGGTGGCG 
CTGTTTCCCC AGTACCGCGA GGCGCAGACG CTGGCGGGGG GCGAGCGGGT GCATCCAGCG 
GACTTGTGGC CCGTGGAGCG GCGCTTCCAT GATCCTGACG TGCCGGTTGC CGCTGCGCCG 
CTGCCCTATG GCTCGGAAGC GCGTGCGCGG CTGGACAGCG CGGTACTGCG GCTGGTGAAG 
AATGCGGACC CGGGCGCCGC TGCAGACATG CAGACAACCT GCCTGGGCTT CGCTGCGGCG 
CAGACCGACC GCCAGGCTCG CGCTTTCTGG AAGATCTGTG CAGGCTTTTT CGAGGCGTTG 
GCGCAGCAGG CACTCAATCC GGACCTGTAT GCCAAGCGCG TCGCTTCGCG CGTGCTGATG 
CAATACGCCA CCTTGGCCAA GGGGGACACG GCGATCAGCG ACCGTCTGGT GCAGGATCTT 
CTGTTCTTCT GCGCCCAGGC CGTGGTGCCT GCGACGGCGG ATGCAGCTTC CCGCATGCCG 
GTACTGACGG CCGTACGGCG CGCGTTTGAT TTGAATCGCT ACCAGCCGGT GGACTATGAC 
CAGCCGCGCT TCGGTCTTTT CGACCCTGCC ATTCTTGCGC AGGCGCGCAA GCGCATTGCC 
GCGGCCACGG AAACCTGGTC CGCACTTGCG GGTGGAGACC GCAACAAGCT CAAACCGGCA 
GCGGACCAGT TCAGCCTGGT GTGCGATTCA TTGCGCAAAC TGCACCCGGA CAGCGAAAGC 
CTGGCACTGG CCCTGACGCG TGCCCTGGAG GCCACCACAC GGTCGGGCGA GCCTCCTTCG 
GCAGCGCTGG CCATGGAAGT GGCCACCTCT GTGCTGTATC TGCAGGCGTC CTTCGAGGAA 
CTGGATGCCG CCCAGCAGTA CATGGCCGAG CGAGCTGCGC GGCTGTCCGA GCGACTGGAC 
AGCGTGGTTG CCGGCGGGGA ATCGCAGCCT CTTGAACCCT GGATGGAAGA GCTGTATCGC 
CGCGTCAGTG ACCACCAGAC CATGGGTAGC GTGGTCGGTG AACTGCGTGC GACTCTGGCA 
GAGGCAGAGA AGTCCATGGA CCAGTTCTTC CGCAGCCCGG AAGACATGAC CCTGCTTGCC 
TCCGTGCCTG GCAGCTTGCA GCAGATGCGC GGCGTGCTGT CCGTGCTGGG ACTGGATCAG 
GCCTCCTTGG CCGTGGTGCG TATGCGCGAC ACGGTCGAGC GCATGCTGAC CAACGACCTG 
CCCGAGGAAG AGCGCCCGCA GGTTTTCGAG AAACTGGGCA ACAGCCTGGG AGCGCTGGGT 
TTTCTCATCG ACATGCTGAG CTACCAGCGT GCCATGGCGC GCAAGCTCTT CGTTTACGAC 
GAAGAGGCGG GCGAGTTGCG TGTCCTCATG GGGCGGGCGC GTGCGCAACT GCCTCATCCG 
GGCGCGCATG ATCAGGAAGC GCCTGCCGTA CCAGCGTTGG AGCTCCCATT CCCCGACGCA 
CCCGAACCCG CGGCTGCGGC TGTGGTCGAG AGCGCCACGC CGTCTGCACT GGCGGACATT 
GATTTTTCGC TGCTTGACGT GGACGCGGCG ACGTCGGAAG GCGCCGTTTC GGCGGTGGCC 
GCTCCGGAAG AGCCCGCGCT TCCAGTGGTT CCTTCGAGCA ACGTCGCTGC CGCAGCCCTG 
CCGGAGGACG ATGGCGAGGA TGAACTGCTC GACATCTTCC TGGAAGAGGC GCGCGAAGTT 
GTTGCCACCG GCTTGTCGGC CATTGACGCG CTGCGTGCTG CACCGGGTGA CCTGAGCGAG 
CAGACCACGC TGCGGCGGGC CTTCCATACC CTCAAGGGTA GCTCGCGCAT GGTGGGGCTG 
AACGAATTTG GTGAAGCCGC GTGGTCCATG GAACAGACGC TCAATGCCTG GCTGGCCGAG 
CAAAAACCCA TCAAGGAAGC GCTGCTGCAA CTCTCCTCCG AGGCGTTGGG CGCCTTTGGT 
CGATGGGCCG ATGACATCGC AGCAGGAGCT GCCGACCCGT GGAAGGCCGA AGCCTTCCGG 
GTTGCGGCGG ATGCGATGCG CACGGATGGC ACGCTGCTGC CACTGGGCGT GCCCTCCCCC 
GATTCTGCGG ACACCACTGC GGCCTTGGCG CCGCAAGTGC CCGCAGAACC GCTGCTGCCT 
GACGAGCCCG TGTTGTCGGT GCCAGACCTT CCGGAGCCCG CGGCCGAACC ACAAGCATTT 
GCCATTGAAC CGCCTGCACC GCTCGAAGCG GTTGACGCCC ACGCCAACGC TGCCGTGCTG 
GAGTTTGATC TGGTGCTGCC AGATGTCGAC GTGCCGTCTC AGGACGCGAC GGCGGGCCAT 
GAGGAAGTTG GCGGCGACTT TGTCGACACC TTCATCGATG CGGATGAGGC CGACCAGGCC 
GTGTTGCCGG TGGAGGAGGT GCCCGCAGCT CCCGAGACGG TGACGGAGGA GGTGGATTTC 
TCCCTGTTCG AGGCTGCGCT GCAAGCCACC GATGCGCCAG CACAGGAGGT CGGCGAACCC 
GCTTCAACAG TAGCGGCTGA CACGGTGGCG GAGCCGGCGG ATAACGCATC CGCGTTGCGG 
CAGGACGAGA CATTCTTTAT CGGCACGGAT GGCGTCCAAC CCGAGTTCAT CCTGGACGAG 
GAGCCAGCGG CGGACGTACC GTCTGCGCAA GCCGCCGAAA CCGTGGCTGG GACGGACGGT 
CCGGTGGAGG AAGCGGTCGA CGAAGCGGTC AAGGTCATCG AGCACCTGCG CATCGGCATA 
CCGTTATACA ACGTGTACCT CAACGAGGCC GATGAATGGT CGCGCCGCCT CGTGACTGCG 
TTGCAGGAAT GGTCGCTGGA ATTGCACCAG CCGCTGCCGG ACAGCGCGGT GGCGTTGGCG 
CACTCGCTGG CAGGCAGCTC TGCCACTGTC GGGTTCTCGG CACTGTCCAA TCTTGCGCGT 
ACCCTGGAAC ATACGCTGCA GCATGTTCAA CTGCTGCAGC AGGGTCTCCC CGAGCATGCG 
CAGGCATTCA ACGCCGCTGC CGAGGACATC CGGAGGCTGC TGCACCAATT CGCCGCAGGC 
TTCCTGAAGG AGCCCAGCGC CTCGGTGCTG GAACAGCTCA ACGAGATCCT GCAGACCGAA 
GTGATCAGCG GCATGGTGTC GCTGGAAGAC CGTGCTTTCG CCGAGGCAGA GGCACAGGCA 
TTTGAGACGC AGGAGCCGGC TCCGGCAACG CCTCAGGGCA CCCTGCATGC GACGGCCGTC 
GACGAGCCGG CTGCCCCATC GCCCGTGGTG GCGCCTACGC TCCCCGTAAG CCGCGACCGC 
GTGATTGGCG ATACTGTCGC GCCTGCCGTG CCGACCACCG TCGATATCGA TGACGACATC 
GATGCGCTGG ACAACATCGA CCCCGATCTG TTTCCCATTT TCGAGGAAGA AGCGGTTGAA 
CTGCTGCCCA CGCTGGGTGG GGCGTTGCGC CAGTGGTCGT CCCGGCCGGA GAACCTGGGC 
GCACGCAGCG AACTGCTGCG CGCCCTGCAC ACCCTCAAGG GCAGTGCGCG CCTGGCAGGC 
GCGATGCGGC TTGGCGAAAT GGCGCACCGC ATGGAAACGG CCGTGGAGCA GATCGACACG 
GAAACCGTGG CGGCCGCAGA CATTGAGCCC TTGCTGGTCA ACTTCGACGC ATTGCAGGCG 
AGTTTCGACG CGCTGCGCGC AACTGGAGCG GAGCCGGCGG TACCGGCCGC TGAGCATGGA 
CAGGACGCAG AGGTGGTCCA ATCCGCTCCC GCGCCAGGGC TTTCCCAGCC GCTCGCTCCG 
CCCGTTGCGT TGCGTGCGCC GTTGGGTGCA GCCCCTGCGC CGGCCCCTCT GCGTGCGGCA 
GGTGGGCATT CCGTGCGCGT GCGTTCGCAA CTGCTCGACC GGCTGGTGAA CCAGGCGGGC 
GAAGTGATGA TCGCGCGTTC GCGGCTGGAC GTGCGCATGT CGCAACTGCG CAGTTCGCTG 
ACCGATTTGT CGGGCAACCT GGAGCGCCTG CGCCAGCAGT TGCGTGACAT CGAGGTACAG 
GCGGAATCGC AGATGCAGTC CCGCTTGGCA CTGTCCAAGG ACATGGCGGC GGGCTTCGAT 
CCGCTGGAAT TCGACCGCTT CACCCGCGTT CAGGAACTGA CGCGCATGAT GGCGGAGTCG 
GTCAACGACG TGGCCACCGT GCAGCGCAAC ATGCAACGTG CGATGGAAGA CGCCGAAGAC 
GATCTGATCG CCCAGGGCCG CCAGGCACGT GAGTTGCAGC GCGACCTGCT GCGCACGCGC 
ATGGTGGAGT TCGAGGGCAT CTCGGAACGC CTCTATGCGG TGGTGCGCCA GGCATCCAAG 
GAAACCGGCA AGCAGATCAA ACTGGACATT TCGGGTGGTT CCATCGAAAT GGACCGCGGC 
GTGCTGGACC GCATGACCCC TGCGTTCGAA CACCTGCTGC GCAACTGCGT GGGGCACGGC 
ATCGAGGAAC CCGAGACGCG CGCTGCTGCC GGCAAGGCTC CTGTGGGCTC GATCTCCATC 
GACTTGCGGC ACGAGGGCAA CGACGTGTCG GTGGCATTCC GCGACGACGG GGCAGGCCTG 
AACATCGCCC GCATCCGGGA CAAGGCCGTG GCGCAAGGGT TGATTGCCCC CGATGCGCAG 
CTGAGCGATG GCGAGGCGGC TAACCTGATC TTCATGCCGG GCTTCTCCAC GGCGTCGGAG 
ATCACGGGCC TTTCCGGCCG TGGTATCGGC ATGGACGTGG TGCGCTCGGA GGTGAATGCC 
CTGGGTGGCC GTATCGAGAC CTCTACCGAG GCGGGCAAGG GAACGTCCTT CCGCATGGTG 
CTGCCGCTCA CGACAGCGGT GACCCAGGTG GTGATGCTGC GCGCGGGCAA CCTGACCATC 
GGCGTGCCAG CCAACCTGGT GGAGATCGTG CGCCGCAGTT CCGGCACGGA GCTCGACGCT 
GCCTACGCCA GCCATACCTT CTCGGATGGC CTGGAGGATC TGCCCTTCTA CTGGGCGGGT 
GCATTGCTCC AGTCGTCCTC GCGCAGCACG GAGGTCACGG GCAAGAGCCG CCCCGTGGTG 
ATCCTGCGCA GCGCGTCGCA GCGCGTCGCG ATGCACGTGG ACGAAGTGCT GGGCAACCAG 
GAAGTCGTGG TGAAGAACCT GGGGCCGCAG CTGTCGCGTC TGCCAGGCCT CGCGGGCATG 
TCCGTGCTGG CTTCGGGCAC CGTGGTGCTG ATCTACAACC CGGTGGCGCT GGCCACGGTG 
TACGGCGACC AGGTGCGCGC GGCCACGCAC GCACCGGCGG TGGACCAAGC CGGCGCGGTG 
GTGGCTGCCG AGGGCGGCAC GCCCGCCGCT TCGCTGCTGG TGCCGGTGCA GCAGGTGCCC 
TTGATCCTGG TGGTGGACGA CTCGATCACC GTGCGCCGCG TCACGCAGCG CCTGCTGCAG 
CGCGAGGGCT ACCGAGTGGC CCTGGCGGCC GACGGCCTGC AGGCGCTGGA GCGCCTGCAG 
GAAGAGCGCC CCGCGGTCGT GTTGTCCGAC ATCGAGATGC CGCGCATGGA CGGTTTTGAC 
CTCGCGCGCA ACATCCGCTC CGACGCTGCG CTGCAGGACC TGCCGATCAT CATGATCACT 
TCGCGCATTG CGCAGAAGCA CCGCGACCAT GCGATGGAAC TCGGCGTGAA CCACTACCTG 
GGCAAGCCCT ACTCCGACGA GGAGCTGATG AGCCTGGTGC GCCACTACGC CAGCCTGAAC 
ACGGAGGCAG CAACCGCCTG A 

 

Protein sequence

MSSVDAANAQ GADWAQGEQD LGPLAWVLDE LRKSLDGAVK AMRRFVRDAE IARESDLASL 
DAGPLRIARQ QLHQASGALE MVGMAPPALV LRAMETAVQR FVQRPETCSD DAAAVIERAS 
FALIEYLEHV LAGKSVSPVA LFPQYREAQT LAGGERVHPA DLWPVERRFH DPDVPVAAAP 
LPYGSEARAR LDSAVLRLVK NADPGAAADM QTTCLGFAAA QTDRQARAFW KICAGFFEAL 
AQQALNPDLY AKRVASRVLM QYATLAKGDT AISDRLVQDL LFFCAQAVVP ATADAASRMP 
VLTAVRRAFD LNRYQPVDYD QPRFGLFDPA ILAQARKRIA AATETWSALA GGDRNKLKPA 
ADQFSLVCDS LRKLHPDSES LALALTRALE ATTRSGEPPS AALAMEVATS VLYLQASFEE 
LDAAQQYMAE RAARLSERLD SVVAGGESQP LEPWMEELYR RVSDHQTMGS VVGELRATLA 
EAEKSMDQFF RSPEDMTLLA SVPGSLQQMR GVLSVLGLDQ ASLAVVRMRD TVERMLTNDL 
PEEERPQVFE KLGNSLGALG FLIDMLSYQR AMARKLFVYD EEAGELRVLM GRARAQLPHP 
GAHDQEAPAV PALELPFPDA PEPAAAAVVE SATPSALADI DFSLLDVDAA TSEGAVSAVA 
APEEPALPVV PSSNVAAAAL PEDDGEDELL DIFLEEAREV VATGLSAIDA LRAAPGDLSE 
QTTLRRAFHT LKGSSRMVGL NEFGEAAWSM EQTLNAWLAE QKPIKEALLQ LSSEALGAFG 
RWADDIAAGA ADPWKAEAFR VAADAMRTDG TLLPLGVPSP DSADTTAALA PQVPAEPLLP 
DEPVLSVPDL PEPAAEPQAF AIEPPAPLEA VDAHANAAVL EFDLVLPDVD VPSQDATAGH 
EEVGGDFVDT FIDADEADQA VLPVEEVPAA PETVTEEVDF SLFEAALQAT DAPAQEVGEP 
ASTVAADTVA EPADNASALR QDETFFIGTD GVQPEFILDE EPAADVPSAQ AAETVAGTDG 
PVEEAVDEAV KVIEHLRIGI PLYNVYLNEA DEWSRRLVTA LQEWSLELHQ PLPDSAVALA 
HSLAGSSATV GFSALSNLAR TLEHTLQHVQ LLQQGLPEHA QAFNAAAEDI RRLLHQFAAG 
FLKEPSASVL EQLNEILQTE VISGMVSLED RAFAEAEAQA FETQEPAPAT PQGTLHATAV 
DEPAAPSPVV APTLPVSRDR VIGDTVAPAV PTTVDIDDDI DALDNIDPDL FPIFEEEAVE 
LLPTLGGALR QWSSRPENLG ARSELLRALH TLKGSARLAG AMRLGEMAHR METAVEQIDT 
ETVAAADIEP LLVNFDALQA SFDALRATGA EPAVPAAEHG QDAEVVQSAP APGLSQPLAP 
PVALRAPLGA APAPAPLRAA GGHSVRVRSQ LLDRLVNQAG EVMIARSRLD VRMSQLRSSL 
TDLSGNLERL RQQLRDIEVQ AESQMQSRLA LSKDMAAGFD PLEFDRFTRV QELTRMMAES 
VNDVATVQRN MQRAMEDAED DLIAQGRQAR ELQRDLLRTR MVEFEGISER LYAVVRQASK 
ETGKQIKLDI SGGSIEMDRG VLDRMTPAFE HLLRNCVGHG IEEPETRAAA GKAPVGSISI 
DLRHEGNDVS VAFRDDGAGL NIARIRDKAV AQGLIAPDAQ LSDGEAANLI FMPGFSTASE 
ITGLSGRGIG MDVVRSEVNA LGGRIETSTE AGKGTSFRMV LPLTTAVTQV VMLRAGNLTI 
GVPANLVEIV RRSSGTELDA AYASHTFSDG LEDLPFYWAG ALLQSSSRST EVTGKSRPVV 
ILRSASQRVA MHVDEVLGNQ EVVVKNLGPQ LSRLPGLAGM SVLASGTVVL IYNPVALATV 
YGDQVRAATH APAVDQAGAV VAAEGGTPAA SLLVPVQQVP LILVVDDSIT VRRVTQRLLQ 
REGYRVALAA DGLQALERLQ EERPAVVLSD IEMPRMDGFD LARNIRSDAA LQDLPIIMIT 
SRIAQKHRDH AMELGVNHYL GKPYSDEELM SLVRHYASLN TEAATA