| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0622 |
|---|
| Symbol | |
|---|
| ID | 5693451 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 740817 |
|---|
| End bp | 741539 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641263213 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001528509 |
|---|
| Protein GI | 158520639 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGCC CTGACAGAAA ACAAATACTG ATTATTGAGG ATGAAGCCCA TATCGCCCAG
GGGCTGCAAC TGAACCTCTC CCTGAAAGGA TACGATGTGA TGGTTGCCGA AAACGGCAGC
CGCGGCCTGG CGGCCTGGAA GGCGCACAAC CCGGACCTGA TCGTGCTGGA CATCATGCTG
CCGGGCATGG ATGGGCTTTC CGTGTTGCAG CATATTCGGC TGGAGGATGA AAAGATCCCC
ATCCTTATCC TGTCGGCCAA AAAAGAGCCG ATCGATAAGC GAAAGGGCTT GACCTACGGG
GTGGACGACT ATCTTACCAA GCCCTTTGAC CTGGAAGAAT TTCTGCTGCG CGTGGACCGT
CTCCTGACCC GGGCTTCCTG GAGCAAGAAA AGCGCGGAAA GTCTGGTACC CACCCGCTAC
ACCTTCGGCA ACAACCAAAT CGATTTTTCA CTGTCCCAGG CGGTCTGCCG CCAGGGCACT
ATTCAACTCA CCGACCAGGA GGTCAAGCTG TTAAAACTCT TTATCACCCA CCAGAACCGG
CCCCTGGCCA GAAAAACCCT GCTGGAGATC GGCTGGGGCT ATACCGGCGA TCCCTCCACC
CGCACCGTGG ACAACTTCAT TGTGCGCTTT CGAAAATATT TCGAGGACGA CCCCAGAAAA
CCGAAATTTT TTAAAAGCAT GCGGTCAGTG GGATACGTAT TCACCCCGCA CCCCGAAGCG
TAG
|
|---|
| Protein sequence | MNSPDRKQIL IIEDEAHIAQ GLQLNLSLKG YDVMVAENGS RGLAAWKAHN PDLIVLDIML
PGMDGLSVLQ HIRLEDEKIP ILILSAKKEP IDKRKGLTYG VDDYLTKPFD LEEFLLRVDR
LLTRASWSKK SAESLVPTRY TFGNNQIDFS LSQAVCRQGT IQLTDQEVKL LKLFITHQNR
PLARKTLLEI GWGYTGDPST RTVDNFIVRF RKYFEDDPRK PKFFKSMRSV GYVFTPHPEA
|
|---|
| |