Gene Rpic12D_0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0560 
Symbol 
ID8018186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp590499 
End bp590996 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content62% 
IMG OID644829339 
Productresponse regulator receiver protein 
Protein accessionYP_002980537 
Protein GI241662177 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.595412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTGGC GACCCGTGGT CGCGCACTGC GAGAACATGA TGCAATCCGC GCGGGTGGAA 
CAACTGGCTG ACTCTCAACC GCTGGCGAAC TCTCCGCTGG CGCATTCCCT GACAGGCTGC
AAAGTGCTGG TAATCGACGA TTCCAGCACC ATTCGCCGTA CCGCGCAGAT TTTCCTCACC
CAGGCCGGGT GCCAGGTCGT GCTGGCCGAA GACGGCTTCG ACGCACTGGC CAAGGTGGGT
GACCTGAAGC CCGATCTCGT GTTCTGCGAC ATCCTGATGC CCAATCTAGA CGGCTACCAG
ACCTGCTCGC TGATCAAGAA AAGCCCAAAG TTTCATGCCA CGCCTGTGAT CATGCTGTCT
TCGCGCGACG GAATTTTTGA CCGCGCGCGG GGCAAGTCGG TCGGGGCGGT GGACCATCTC
GCCAAGCCGT TCTCGAAGGA AGCGCTGCTG GAGGCGGTCC AGACGCATTT GCCGGTGGCG
CAAGCCGCCG CGCAGTGA
 
Protein sequence
MSWRPVVAHC ENMMQSARVE QLADSQPLAN SPLAHSLTGC KVLVIDDSST IRRTAQIFLT 
QAGCQVVLAE DGFDALAKVG DLKPDLVFCD ILMPNLDGYQ TCSLIKKSPK FHATPVIMLS
SRDGIFDRAR GKSVGAVDHL AKPFSKEALL EAVQTHLPVA QAAAQ