Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0560 |
Symbol | |
ID | 8018186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 590499 |
End bp | 590996 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644829339 |
Product | response regulator receiver protein |
Protein accession | YP_002980537 |
Protein GI | 241662177 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.595412 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTGGC GACCCGTGGT CGCGCACTGC GAGAACATGA TGCAATCCGC GCGGGTGGAA CAACTGGCTG ACTCTCAACC GCTGGCGAAC TCTCCGCTGG CGCATTCCCT GACAGGCTGC AAAGTGCTGG TAATCGACGA TTCCAGCACC ATTCGCCGTA CCGCGCAGAT TTTCCTCACC CAGGCCGGGT GCCAGGTCGT GCTGGCCGAA GACGGCTTCG ACGCACTGGC CAAGGTGGGT GACCTGAAGC CCGATCTCGT GTTCTGCGAC ATCCTGATGC CCAATCTAGA CGGCTACCAG ACCTGCTCGC TGATCAAGAA AAGCCCAAAG TTTCATGCCA CGCCTGTGAT CATGCTGTCT TCGCGCGACG GAATTTTTGA CCGCGCGCGG GGCAAGTCGG TCGGGGCGGT GGACCATCTC GCCAAGCCGT TCTCGAAGGA AGCGCTGCTG GAGGCGGTCC AGACGCATTT GCCGGTGGCG CAAGCCGCCG CGCAGTGA
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Protein sequence | MSWRPVVAHC ENMMQSARVE QLADSQPLAN SPLAHSLTGC KVLVIDDSST IRRTAQIFLT QAGCQVVLAE DGFDALAKVG DLKPDLVFCD ILMPNLDGYQ TCSLIKKSPK FHATPVIMLS SRDGIFDRAR GKSVGAVDHL AKPFSKEALL EAVQTHLPVA QAAAQ
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