More than 300 homologs were found in PanDaTox collection
for query gene Pcar_2711 on replicon NC_007498
Organism: Pelobacter carbinolicus DSM 2380



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007498  Pcar_2711  two component signal transduction response regulator  100 
 
 
131 aa  268  2e-71  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_0985  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  39.34 
 
 
704 aa  91.3  4e-18  Herpetosiphon aurantiacus ATCC 23779  Bacteria  decreased coverage  0.000494124  n/a   
 
 
-
 
NC_007498  Pcar_2709  two component signal transduction response regulator  38.98 
 
 
429 aa  88.6  2e-17  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3008  multi-sensor hybrid histidine kinase  38.33 
 
 
953 aa  87.8  4e-17  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_1517  response regulator receiver protein  41.38 
 
 
127 aa  85.9  2e-16  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.394491  normal  0.160821 
 
 
-
 
NC_011884  Cyan7425_2337  signal transduction histidine kinase  39.34 
 
 
352 aa  85.1  3e-16  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_007955  Mbur_1557  response regulator receiver  39.13 
 
 
131 aa  84.3  5e-16  Methanococcoides burtonii DSM 6242  Archaea  hitchhiker  0.000000412225  n/a   
 
 
-
 
NC_009712  Mboo_1488  response regulator receiver protein  39.32 
 
 
450 aa  84  6e-16  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.379239 
 
 
-
 
NC_007355  Mbar_A3448  putative transcriptional regulator  36.07 
 
 
143 aa  83.2  0.000000000000001  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.132297  normal  0.0606491 
 
 
-
 
NC_009712  Mboo_0900  response regulator receiver protein  36.44 
 
 
126 aa  83.2  0.000000000000001  Candidatus Methanoregula boonei 6A8  Archaea  normal  hitchhiker  0.000110071 
 
 
-
 
NC_007796  Mhun_1200  response regulator receiver domain-containing protein  40.54 
 
 
248 aa  82.8  0.000000000000001  Methanospirillum hungatei JF-1  Archaea  normal  0.0783054  normal  0.0763711 
 
 
-
 
NC_007955  Mbur_2285  response regulator receiver  35.77 
 
 
130 aa  82.4  0.000000000000002  Methanococcoides burtonii DSM 6242  Archaea  hitchhiker  0.000158247  n/a   
 
 
-
 
NC_013173  Dbac_0866  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  37.5 
 
 
701 aa  82.4  0.000000000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.711392  n/a   
 
 
-
 
NC_007796  Mhun_2637  putative PAS/PAC sensor protein  36.67 
 
 
461 aa  80.9  0.000000000000006  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_008554  Sfum_2639  multi-sensor hybrid histidine kinase  38.79 
 
 
817 aa  80.1  0.000000000000009  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009712  Mboo_1528  response regulator receiver protein  37.07 
 
 
450 aa  80.1  0.00000000000001  Candidatus Methanoregula boonei 6A8  Archaea  hitchhiker  0.00374994  normal  0.77554 
 
 
-
 
NC_013730  Slin_3427  two component transcriptional regulator, LytTR family  37.29 
 
 
256 aa  77.8  0.00000000000004  Spirosoma linguale DSM 74  Bacteria  normal  0.239231  normal 
 
 
-
 
NC_011769  DvMF_2677  response regulator receiver sensor hybrid histidine kinase  38.33 
 
 
636 aa  77.8  0.00000000000005  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.068934 
 
 
-
 
NC_009483  Gura_2117  putative PAS/PAC sensor protein  37.5 
 
 
257 aa  77.4  0.00000000000006  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_0428  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  34.19 
 
 
455 aa  76.6  0.00000000000009  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_0439  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  34.19 
 
 
455 aa  77  0.00000000000009  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.444664 
 
 
-
 
NC_011832  Mpal_2212  response regulator receiver protein  35.04 
 
 
122 aa  76.6  0.0000000000001  Methanosphaerula palustris E1-9c  Archaea  normal  0.092497  normal  0.290386 
 
 
-
 
NC_008751  Dvul_0434  putative PAS/PAC sensor protein  35.2 
 
 
458 aa  76.3  0.0000000000001  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_007796  Mhun_3039  response regulator receiver sensor signal transduction histidine kinase  34.71 
 
 
355 aa  76.3  0.0000000000002  Methanospirillum hungatei JF-1  Archaea  normal  0.610599  normal 
 
 
-
 
NC_011831  Cagg_1360  putative PAS/PAC sensor protein  34.71 
 
 
429 aa  75.9  0.0000000000002  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00110028  hitchhiker  0.000665614 
 
 
-
 
NC_011832  Mpal_0573  response regulator receiver protein  37.93 
 
 
261 aa  75.9  0.0000000000002  Methanosphaerula palustris E1-9c  Archaea  normal  0.666159  normal  0.332219 
 
 
-
 
NC_009712  Mboo_1358  putative PAS/PAC sensor protein  38.39 
 
 
404 aa  75.1  0.0000000000003  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.873442  normal  0.0258422 
 
 
-
 
NC_009712  Mboo_2407  response regulator receiver protein  33.06 
 
 
182 aa  75.1  0.0000000000003  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_009712  Mboo_1813  response regulator receiver protein  34.17 
 
 
316 aa  75.1  0.0000000000003  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.445517  normal  0.445863 
 
 
-
 
NC_011729  PCC7424_1114  response regulator receiver sensor signal transduction histidine kinase  35.34 
 
 
373 aa  74.7  0.0000000000004  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013730  Slin_3896  two component transcriptional regulator, LytTR family  34.31 
 
 
245 aa  74.7  0.0000000000004  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.356034 
 
 
-
 
NC_009712  Mboo_1807  putative PAS/PAC sensor protein  35 
 
 
258 aa  74.7  0.0000000000004  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.254511 
 
 
-
 
NC_007796  Mhun_0118  putative PAS/PAC sensor protein  38.02 
 
 
265 aa  74.3  0.0000000000005  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_011832  Mpal_1773  response regulator receiver sensor signal transduction histidine kinase  31.09 
 
 
386 aa  74.3  0.0000000000005  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_007796  Mhun_1724  response regulator receiver domain-containing protein  33.63 
 
 
352 aa  73.6  0.0000000000008  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_011884  Cyan7425_4302  signal transduction histidine kinase  31.93 
 
 
343 aa  73.6  0.0000000000008  Cyanothece sp. PCC 7425  Bacteria  normal  0.219335  normal  0.321802 
 
 
-
 
NC_011769  DvMF_1460  putative PAS/PAC sensor protein  36.21 
 
 
474 aa  73.6  0.0000000000009  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.81808 
 
 
-
 
NC_007955  Mbur_0841  response regulator receiver  36.21 
 
 
135 aa  73.6  0.0000000000009  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_007796  Mhun_2645  putative PAS/PAC sensor protein  34.48 
 
 
336 aa  73.2  0.000000000001  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_011661  Dtur_1110  response regulator receiver and ANTAR domain protein  33.61 
 
 
197 aa  72.4  0.000000000002  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0520878  n/a   
 
 
-
 
NC_007413  Ava_3669  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  36.75 
 
 
432 aa  72  0.000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007955  Mbur_0834  response regulator receiver  37.39 
 
 
134 aa  72.4  0.000000000002  Methanococcoides burtonii DSM 6242  Archaea  hitchhiker  0.000017528  n/a   
 
 
-
 
NC_009712  Mboo_1007  putative GAF sensor protein  37.5 
 
 
311 aa  72.8  0.000000000002  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.164021  normal  0.860345 
 
 
-
 
NC_007519  Dde_3002  putative PAS/PAC sensor protein  39.13 
 
 
469 aa  71.6  0.000000000003  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.345319  n/a   
 
 
-
 
NC_009483  Gura_1730  multi-sensor signal transduction histidine kinase  31.54 
 
 
591 aa  72  0.000000000003  Geobacter uraniireducens Rf4  Bacteria  normal  0.319599  n/a   
 
 
-
 
NC_009712  Mboo_1808  putative PAS/PAC sensor protein  32.5 
 
 
603 aa  71.6  0.000000000004  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.268482 
 
 
-
 
NC_009712  Mboo_1497  putative PAS/PAC sensor protein  33.06 
 
 
380 aa  71.6  0.000000000004  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.506851  normal  0.137069 
 
 
-
 
NC_007796  Mhun_2686  putative PAS/PAC sensor protein  31.9 
 
 
337 aa  70.9  0.000000000006  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.209027 
 
 
-
 
NC_007908  Rfer_0895  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  31.25 
 
 
701 aa  70.9  0.000000000006  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_3511  response regulator receiver sensor signal transduction histidine kinase  33.91 
 
 
384 aa  70.5  0.000000000007  Polaromonas sp. JS666  Bacteria  normal  normal  0.253652 
 
 
-
 
NC_011832  Mpal_0048  putative PAS/PAC sensor protein  35.34 
 
 
255 aa  70.5  0.000000000007  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_007908  Rfer_0893  response regulator receiver sensor signal transduction histidine kinase  32.76 
 
 
359 aa  70.5  0.000000000008  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_3178  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  32.5 
 
 
426 aa  70.1  0.000000000009  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_4326  PAS/PAC sensor hybrid histidine kinase  32.48 
 
 
571 aa  69.7  0.00000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3003  PAS/PAC sensor hybrid histidine kinase  30.58 
 
 
498 aa  68.9  0.00000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_2085  putative two component, sigma54 specific, transcriptional regulator, Fis family  34.19 
 
 
457 aa  68.9  0.00000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_4564  response regulator receiver sensor signal transduction histidine kinase  33.33 
 
 
376 aa  68.9  0.00000000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.531352 
 
 
-
 
NC_013132  Cpin_6068  response regulator receiver protein  35.59 
 
 
248 aa  69.3  0.00000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1374  putative PAS/PAC sensor protein  35.29 
 
 
408 aa  67.4  0.00000000006  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009712  Mboo_1242  multi-sensor signal transduction histidine kinase  30.17 
 
 
472 aa  67  0.00000000009  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.41521  normal 
 
 
-
 
NC_011831  Cagg_2933  response regulator receiver and ANTAR domain protein  35.25 
 
 
194 aa  66.6  0.0000000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0803562  normal  0.225953 
 
 
-
 
NC_007413  Ava_0066  response regulator receiver sensor signal transduction histidine kinase  36.13 
 
 
377 aa  66.6  0.0000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  0.359193  normal  0.0132857 
 
 
-
 
NC_010551  BamMC406_1235  multi-sensor hybrid histidine kinase  30 
 
 
989 aa  66.2  0.0000000001  Burkholderia ambifaria MC40-6  Bacteria  normal  0.172784  normal 
 
 
-
 
NC_009712  Mboo_1912  response regulator receiver protein  34.19 
 
 
263 aa  66.6  0.0000000001  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.181503  normal  0.732361 
 
 
-
 
NC_014248  Aazo_1725  multi-sensor signal transduction histidine kinase  32.5 
 
 
499 aa  66.6  0.0000000001  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_1348  two component, sigma54 specific, transcriptional regulator, Fis family  36.54 
 
 
461 aa  65.5  0.0000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4529  multi-sensor hybrid histidine kinase  30.83 
 
 
989 aa  66.2  0.0000000002  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009712  Mboo_1311  putative PAS/PAC sensor protein  33.33 
 
 
340 aa  66.2  0.0000000002  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.187179 
 
 
-
 
NC_011886  Achl_1689  response regulator receiver and ANTAR domain protein  30.33 
 
 
201 aa  65.5  0.0000000002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000385738 
 
 
-
 
NC_008541  Arth_1694  response regulator receiver/ANTAR domain-containing protein  30.08 
 
 
201 aa  65.9  0.0000000002  Arthrobacter sp. FB24  Bacteria  normal  0.136848  n/a   
 
 
-
 
NC_013132  Cpin_0268  sigma54 specific transcriptional regulator, Fis family  33.04 
 
 
651 aa  65.1  0.0000000003  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_1631  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  31.3 
 
 
561 aa  64.7  0.0000000004  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.608678  n/a   
 
 
-
 
NC_007796  Mhun_0455  response regulator receiver domain-containing protein  32.74 
 
 
238 aa  64.7  0.0000000004  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.21261 
 
 
-
 
NC_010338  Caul_4330  response regulator receiver protein  31.09 
 
 
127 aa  64.3  0.0000000006  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_3671  Sigma 54 interacting domain protein  31.03 
 
 
657 aa  63.2  0.000000001  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_5028  response regulator receiver and ANTAR domain protein  26.32 
 
 
198 aa  62.8  0.000000001  Conexibacter woesei DSM 14684  Bacteria  normal  0.181706  normal  0.0113639 
 
 
-
 
NC_007794  Saro_0488  two-component response regulator  26.15 
 
 
265 aa  62.4  0.000000002  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2737  response regulator receiver domain-containing protein  33.06 
 
 
139 aa  61.6  0.000000003  Rhodoferax ferrireducens T118  Bacteria  hitchhiker  0.00154696  n/a   
 
 
-
 
NC_013159  Svir_25990  response regulator with putative antiterminator output domain protein  30.51 
 
 
204 aa  61.6  0.000000003  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_5540  response regulator receiver and ANTAR domain protein  29.66 
 
 
200 aa  61.2  0.000000004  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009956  Dshi_3837  two-component response regulator  30.77 
 
 
271 aa  61.2  0.000000004  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.539705  normal 
 
 
-
 
NC_007955  Mbur_2294  response regulator receiver  31.15 
 
 
134 aa  61.6  0.000000004  Methanococcoides burtonii DSM 6242  Archaea  normal  0.371138  n/a   
 
 
-
 
NC_008686  Pden_2822  two-component response regulator  31.62 
 
 
267 aa  61.6  0.000000004  Paracoccus denitrificans PD1222  Bacteria  normal  0.230061  normal 
 
 
-
 
NC_009428  Rsph17025_2703  two-component response regulator  32.48 
 
 
269 aa  61.2  0.000000005  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007575  Suden_0616  two component transcriptional regulator  28.7 
 
 
249 aa  61.2  0.000000005  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_2932  two-component response regulator  32.48 
 
 
269 aa  61.2  0.000000005  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0031  response regulator receiver protein  35.59 
 
 
243 aa  60.8  0.000000006  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_1223  response regulator receiver and ANTAR domain protein  29.41 
 
 
229 aa  60.8  0.000000006  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.788892 
 
 
-
 
NC_009712  Mboo_2032  response regulator receiver protein  30.77 
 
 
387 aa  60.5  0.000000007  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.0686114 
 
 
-
 
NC_007493  RSP_1274  two-component response regulator  32.48 
 
 
269 aa  60.1  0.000000009  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_007490  RSP_4195  response regulator receiver protein  33.61 
 
 
154 aa  59.7  0.00000001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.81513  n/a   
 
 
-
 
NC_009667  Oant_1246  two-component response regulator  29.31 
 
 
264 aa  59.7  0.00000001  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.660623  n/a   
 
 
-
 
NC_009253  Dred_1556  multi-sensor hybrid histidine kinase  36.21 
 
 
1021 aa  59.7  0.00000001  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_1012  response regulator receiver domain-containing protein  29.41 
 
 
109 aa  60.1  0.00000001  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_0913  response regulator receiver protein  26.05 
 
 
124 aa  59.7  0.00000001  Candidatus Methanoregula boonei 6A8  Archaea  normal  hitchhiker  0.0000000115879 
 
 
-
 
NC_008048  Sala_2186  two-component response regulator  27.73 
 
 
264 aa  59.7  0.00000001  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_007355  Mbar_A2510  transcriptional regulator  29.6 
 
 
157 aa  58.9  0.00000002  Methanosarcina barkeri str. Fusaro  Archaea  decreased coverage  0.000843612  normal  0.354799 
 
 
-
 
NC_013132  Cpin_4853  two component, sigma54 specific, transcriptional regulator, Fis family  29.51 
 
 
457 aa  58.9  0.00000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.231814  hitchhiker  0.00735887 
 
 
-
 
NC_009664  Krad_2958  response regulator receiver and ANTAR domain protein  29.91 
 
 
229 aa  58.9  0.00000002  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.799557  normal  0.502809 
 
 
-
 
NC_010816  BLD_0739  putative response regulator  30.43 
 
 
261 aa  59.3  0.00000002  Bifidobacterium longum DJO10A  Bacteria  hitchhiker  0.000540248  n/a   
 
 
-
 
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