| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1556 |
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| Symbol | |
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| ID | 4958077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 1690466 |
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| End bp | 1693531 |
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| Gene Length | 3066 bp |
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| Protein Length | 1021 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640180729 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001112909 |
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| Protein GI | 134299413 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain
[COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATGG GTAAAAAATT GTTTGCCAGT TATATGGTGT TTGTTCTGAT CATTGGTATT
ATTGTTTCTA CGGATTACTA CGATTCTAAA ATGACAAAAA AGCATACGGT TGAAATAGCT
GAACTGAAGC CATTAAATGA TGTTATTCAA AATTTATCTT ACGATTTTTT GATGCAAAGG
AATTCAATTA ACCAATATAT TGTTAGCAAA GATTTGGCTG CTCTAGATAC CTATCGGGAA
TATCATTTAA AAGCGGAGAA GGATATTACC CACTTAAAGG ACTTTACTAA TAAATTCCCA
GAGATATCTA CTGAAATAGA AGCAGCCATT ATGGAGTCCC GGCAACAAAA CAAAGCACTC
AATGAAATCG TTAATCAGGC TGTTTTTGAA GGAGTTCAAG ATTCAAAGAT TCTTTTTTCG
AACTCTCGAC ATCAAGACGA TGAATTTTTG TTTGCATTAA ATAATTTACA AAACAAAACA
CAAAACATTA TTCGAAATTC ATTAAACAAA ATGGTGCAGC AGTCCGAGGA TTTACATCAA
TTTAATTATT TATTATTAAT CCTTTCTCTT CCTTTGGGGG TCATCCTGGG CTATGTTCTT
TCAAAACGCT ATACCAATCC CATTAGAAAG CTGATTAAGG CCACAGCTAA GGATGAAAAT
GGAAATTACA AGACAATTCA CGGGGTTTTG CCCAAGGATG AAGTAGGAAT ACTGGCCACT
GCATTTAATG ATATGGTTAT TACAATTAAC AATGAGCATA GTCTGCTAAA GGAACAGAAT
TTAAAACTTC TTTCACAACA GGAAGAAATG TCCGCCCAAA ACGAGGAAAT CAGGGCCCAG
CAGGAGGAAT TATCAGCTAT CCTGGATCAG GTTAATGCTG AGCAGGATAA ACTACTTCAA
CTGCATGAGT TTAACACCCT GCTAAACGAA TCCATTGAAT TAACTGTTCT TTCGGATACC
ATACTCCGAT ACTGTCTGAA GGCCTTTAAG GCAGATGCAG GGGCCCTACT GGTAAAGGAC
CCTGATGAAG AAGCCATCTA TATTGCTGCA TCCGCTGGCT TAGATGCCTC TGTGGGTGAG
ACAATTCCTA TGGATAACCT ACGGGGCTTA GTAAAGCGAT GCTACCTGGA GCAGCAAAGT
ATCATTGTAA GCTATCCGGC AACAGAAGTT TCTGCAGGCA TCAGGCTTGC AGAAACGCAA
AGATCCGCTC ATGAAGTATA TGTCCCCTTT ACCTTTAATA GTCAGAAGCT AGGGTTTATA
ATTCTTAGTA AACTGTCTGG CAATAGATTT CATGATAATG AAGTTACTTT GTTAGAAGCA
CAAATGAGCC AAGGTGCTAT GGCTATCAAC AATGCCTTAG TGTATAAGCG GATTGAAAAG
ATGTATGAAG ATATACTGGA GCAAGCAGCT TTGGTAGAAC AATTAAACGC CCAGTTGGAA
ACAGAAAAGG ATAACCTAAG TCGAGCAAGG GAAATTACTC GGTCTGTAGT TGAATCTATC
AATGAAGCTA TTGTTATGGT TAATATAGAT GATGAGGTAG TTGCCGTCAA TAAGCGCTGG
CAAGAGTTAT TTGAGTATGA GGGGGATCTC AGGGGTAGTT CCTCCGAGGT ACTTTTCAGA
ACAAGCATTG ACTGCTTGGA AAATTCCGCA GAGGCCTACA ATAAGTTGAC AGAGATTATG
GCCCACCCCA TGAATCAAGG CGAATTTAAT GCAGTTCAAG AAAATCGGGT ATTACGTGTT
TGGACTGGTC CAGTTTTAGA CCGGGCAGAG AATCTGATTG GACGGTTATA TGTCTTTCGT
GATATCACCA TAGAAGCTGA AGTGGATAGG ATGAAGTCTG AATTTGTTAG CACAGTAAGC
CATGAATTAA GAACACCACT CTCAAGTATT TTAGGTTTTT CTGAACTTCT GCTGATTAAA
AAGCTTAGTG AGGAAGCACG CACGAAGTAT ACCAAGACCA TTCATAAAGA AGCAAAGAGG
TTAACTGACT TGGTCAATGA TTTCTTAGAC TTGCAAAGAA TGGAATTAGG AAAACAGGTG
TACGACAAAG AAGACTTTAT TGCCCTAGAT TTACTTGCCG AAGTTGTAGA GTCCTTTGCT
GCTTCTGGTG TTGATCACGA CATAACCCTT CAAACTGTCG AAAGGTTTTT CATAAACGCT
GATAAAGAGC GGGTTACCCA GGTACTGATC AATCTATTGT CAAATGCTGT GAAGTTTTCG
CCCAAGGGCA CTAAAATAAC CCTGGGAGTT ACTCCTGATG AGGAATATGC CAAATTTTTT
ATAAAAGATC AAGGGCTAGG GATACCAAAG GATGTTCAAG ATAATCTTTT TTCAAAGTTC
TACCGGGTAG ATAATTCAGA CAGAAGAAAA ATTGGCGGTA CAGGGCTGGG CCTTTCTATT
TGCAAAGAAA TTGTAGAGGC TCACGGAGGG AAAATATGGG TGGAATCCGA GCATGGACAT
GGGAGCGTTT TCTATTTTAC TGTTAAGCTT TCCGAAAAAT CTATAACTGG CGATGCAGAA
ATAAACTCAG CCCCCAGACT TCAAAAAGAT AAATCTATCA AGAGAGTTCT GCTTGTGGAG
GATGACCGCA GTCTAGCCTT ATTGTTTAAA GAACATCTGG CTGATTGTGG CTATCGGGTT
GAGGTTAGAG CAACCGGAGA AGAGGCTTTG AAGACTATTA AACATTCCAA GCCGGATGTC
ATTATTCTTG ATATTTTACT GGCTGGTGAA ATGAATGGCT GGACCATTCT ACAGACCCTT
AAACAGGATA AGAGCACAGA AAACATACCC ATTATAGTTT CTAGTTGTCT GCCGGAAAAG
GAACAGGCTT TGGCATTGGG TGCAAACGAA TACCTCATTA AACCCTTCGA ACCTCAGTTG
TTGATCCGGA TTGTCAAGGA TTTGCTTTCC CGGGAGAAAG ACAGCCAAAC CTTTATGATA
GTCCCCAAAA ACCAAAAGGT AAGTCAATTA TTAGTGATGA GGCTAAAAGA AAAAGGCTTC
TTTGTAAAGG ATATCATTGA TGAAAAAGAG GCAATTTTAG TTAGTATGGA TAAACCGATT
GATTAA
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| Protein sequence | MNMGKKLFAS YMVFVLIIGI IVSTDYYDSK MTKKHTVEIA ELKPLNDVIQ NLSYDFLMQR
NSINQYIVSK DLAALDTYRE YHLKAEKDIT HLKDFTNKFP EISTEIEAAI MESRQQNKAL
NEIVNQAVFE GVQDSKILFS NSRHQDDEFL FALNNLQNKT QNIIRNSLNK MVQQSEDLHQ
FNYLLLILSL PLGVILGYVL SKRYTNPIRK LIKATAKDEN GNYKTIHGVL PKDEVGILAT
AFNDMVITIN NEHSLLKEQN LKLLSQQEEM SAQNEEIRAQ QEELSAILDQ VNAEQDKLLQ
LHEFNTLLNE SIELTVLSDT ILRYCLKAFK ADAGALLVKD PDEEAIYIAA SAGLDASVGE
TIPMDNLRGL VKRCYLEQQS IIVSYPATEV SAGIRLAETQ RSAHEVYVPF TFNSQKLGFI
ILSKLSGNRF HDNEVTLLEA QMSQGAMAIN NALVYKRIEK MYEDILEQAA LVEQLNAQLE
TEKDNLSRAR EITRSVVESI NEAIVMVNID DEVVAVNKRW QELFEYEGDL RGSSSEVLFR
TSIDCLENSA EAYNKLTEIM AHPMNQGEFN AVQENRVLRV WTGPVLDRAE NLIGRLYVFR
DITIEAEVDR MKSEFVSTVS HELRTPLSSI LGFSELLLIK KLSEEARTKY TKTIHKEAKR
LTDLVNDFLD LQRMELGKQV YDKEDFIALD LLAEVVESFA ASGVDHDITL QTVERFFINA
DKERVTQVLI NLLSNAVKFS PKGTKITLGV TPDEEYAKFF IKDQGLGIPK DVQDNLFSKF
YRVDNSDRRK IGGTGLGLSI CKEIVEAHGG KIWVESEHGH GSVFYFTVKL SEKSITGDAE
INSAPRLQKD KSIKRVLLVE DDRSLALLFK EHLADCGYRV EVRATGEEAL KTIKHSKPDV
IILDILLAGE MNGWTILQTL KQDKSTENIP IIVSSCLPEK EQALALGANE YLIKPFEPQL
LIRIVKDLLS REKDSQTFMI VPKNQKVSQL LVMRLKEKGF FVKDIIDEKE AILVSMDKPI
D
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