Gene Saro_0488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0488 
Symbol 
ID3918617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp530563 
End bp531360 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content66% 
IMG OID640443218 
Producttwo-component response regulator 
Protein accessionYP_495770 
Protein GI87198513 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCTGG GTGCCAAGGT TGCCAATCAA CTTCCCTACC TGCGTCGCTA TGCCCGCGCC 
CTGACGGGTA GCCAGTCGGC CGGCGATTCG TTCGTGCGCG CGACGCTTGA GGCCGCGCTG
GCCGACGACG ACCTGCGCGC CACCATCGGC GAGGGTCGCG CACAGCTCTA CCATGCGTTC
AACCGGGTCT GGTCGACCGC CTATGTCGAC ACGGCGGACC GCTCGTCCGG AAGCCTCGGG
CAGCACGAAG CTGCCGCCCA GGAACGACTG GCCGCGATGA CGCCGGCAAA CCGCCAGGCC
CTGCTGCTCA CGACGCTGGA AGACTTCAGC ATCGACGATG CCGCCTACAT CATGGACCGC
GAGCCCGAGG ACGTGGAAAG CCTCGTGCAG GACGCCATCG CCGAAATCGA CCGCGAATCC
GCGACCTCCG TGCTCATCAT CGAGGACGAG CCGCTCATCT CGATGCAACT CGAAGACCTC
GTGCGCTCGC TCGGGCACGA CGTCTGCGGC ATGGCCGCAA CTCGCACCCA GGCGCTCGAG
ATCGTCCAGC GCGAACAGCC CGGCCTTGTC CTCGCGGATA TCCAGCTCGC TGACGGCAGC
TCCGGCCTCG ATGCGGTCGA CGACATCCTG AAGATCGGGT CGGTACCGGT TATCTTCATC
ACCGCCTATC CGGAACGCCT GCTGACCGGC AACCGTCCGG AACCGACCTA CCTCATCACC
AAGCCGTTCC AGGAACAGAC CGTGCGCACC GCGATCAGCC AGGCCCTGTT CTTCGGCTCG
AGCCGTCCGC TCGGCTGA
 
Protein sequence
MSLGAKVANQ LPYLRRYARA LTGSQSAGDS FVRATLEAAL ADDDLRATIG EGRAQLYHAF 
NRVWSTAYVD TADRSSGSLG QHEAAAQERL AAMTPANRQA LLLTTLEDFS IDDAAYIMDR
EPEDVESLVQ DAIAEIDRES ATSVLIIEDE PLISMQLEDL VRSLGHDVCG MAATRTQALE
IVQREQPGLV LADIQLADGS SGLDAVDDIL KIGSVPVIFI TAYPERLLTG NRPEPTYLIT
KPFQEQTVRT AISQALFFGS SRPLG