More than 300 homologs were found in PanDaTox collection
for query gene Elen_0204 on replicon NC_013204
Organism: Eggerthella lenta DSM 2243



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013204  Elen_0204  transcriptional regulator, LysR family  100 
 
 
320 aa  659    Eggerthella lenta DSM 2243  Bacteria  normal  0.0533244  normal  0.505533 
 
 
-
 
NC_013204  Elen_2118  transcriptional regulator, LysR family  30.18 
 
 
301 aa  98.2  2e-19  Eggerthella lenta DSM 2243  Bacteria  normal  0.0495848  normal  0.686306 
 
 
-
 
NC_008527  LACR_0375  LysR family transcriptional regulator  31.34 
 
 
301 aa  83.2  0.000000000000006  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.104168  n/a   
 
 
-
 
NC_002976  SERP2118  LysR family transcriptional regulator  23.89 
 
 
294 aa  80.5  0.00000000000004  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_2618  LysR substrate-binding  26.05 
 
 
292 aa  79.7  0.00000000000006  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_2565  LysR family transcriptional regulator  26.05 
 
 
292 aa  79.7  0.00000000000006  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_011761  AFE_0761  transcriptional regulator, LysR family  24.34 
 
 
316 aa  77.8  0.0000000000002  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.211674  n/a   
 
 
-
 
NC_011206  Lferr_0907  transcriptional regulator, LysR family  24 
 
 
302 aa  77.4  0.0000000000003  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_013721  HMPREF0424_0849  transcriptional regulator, LysR family  29.21 
 
 
310 aa  77  0.0000000000004  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_008786  Veis_1029  LysR family transcriptional regulator  29.17 
 
 
306 aa  75.5  0.000000000001  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.850278  normal 
 
 
-
 
NC_010320  Teth514_0147  LysR family transcriptional regulator  26.05 
 
 
296 aa  74.7  0.000000000002  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_0958  transcriptional regulator, LysR family  25.57 
 
 
298 aa  73.9  0.000000000003  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.181705  normal 
 
 
-
 
NC_011761  AFE_0817  transcriptional regulator, LysR family  25.57 
 
 
296 aa  73.9  0.000000000003  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0390  transcriptional regulator, LysR family  26.79 
 
 
293 aa  73.9  0.000000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  0.530873  n/a   
 
 
-
 
NC_008786  Veis_4616  LysR family transcriptional regulator  29.85 
 
 
299 aa  73.9  0.000000000003  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.194737  normal 
 
 
-
 
NC_013595  Sros_0746  transcriptional regulator, LysR family  28.12 
 
 
298 aa  73.2  0.000000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.265691  normal 
 
 
-
 
NC_010505  Mrad2831_4382  LysR family transcriptional regulator  25.66 
 
 
300 aa  72.8  0.000000000007  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0658  LysR family transcriptional regulator  36.08 
 
 
328 aa  72.4  0.000000000008  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_1307  transcriptional regulator, LysR family  28.34 
 
 
295 aa  72.4  0.000000000009  Variovorax paradoxus S110  Bacteria  normal  0.262852  n/a   
 
 
-
 
NC_004116  SAG0691  LysR family transcriptional regulator  27.32 
 
 
294 aa  71.2  0.00000000002  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.780494  n/a   
 
 
-
 
NC_010623  Bphy_5353  LysR family transcriptional regulator  29.41 
 
 
307 aa  71.6  0.00000000002  Burkholderia phymatum STM815  Bacteria  normal  normal  0.532482 
 
 
-
 
NC_007492  Pfl01_3368  DNA-binding transcriptional regulator CynR  29.22 
 
 
292 aa  71.2  0.00000000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.578087  normal 
 
 
-
 
NC_014165  Tbis_1875  LysR family transcriptional regulator  39.82 
 
 
307 aa  71.2  0.00000000002  Thermobispora bispora DSM 43833  Bacteria  normal  0.219767  normal  0.699734 
 
 
-
 
NC_011368  Rleg2_4681  transcriptional regulator, LysR family  31.71 
 
 
304 aa  70.9  0.00000000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.468795  normal 
 
 
-
 
NC_008345  Sfri_0923  putative DNA-binding transcriptional regulator  30.77 
 
 
300 aa  70.1  0.00000000004  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3783  transcriptional regulator, LysR family  35.66 
 
 
289 aa  70.1  0.00000000005  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A2509  putative transcriptional regulator  25.45 
 
 
292 aa  70.1  0.00000000005  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_3129  nitrogen assimilation transcriptional regulator  29.8 
 
 
307 aa  70.1  0.00000000005  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A2625  putative transcriptional regulator  25.45 
 
 
292 aa  69.7  0.00000000006  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.351429 
 
 
-
 
NC_011080  SNSL254_A2466  putative transcriptional regulator  25.45 
 
 
292 aa  69.7  0.00000000006  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.11864 
 
 
-
 
NC_013131  Caci_8034  transcriptional regulator, LysR family  27.5 
 
 
300 aa  69.7  0.00000000006  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B2417  putative transcriptional regulator  25.45 
 
 
292 aa  69.7  0.00000000006  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_4050  LysR family transcriptional regulator  24.75 
 
 
308 aa  69.7  0.00000000006  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_0525  fhu operon transcriptional regulator  27.23 
 
 
307 aa  69.7  0.00000000007  Bifidobacterium longum DJO10A  Bacteria  normal  0.262224  n/a   
 
 
-
 
NC_008532  STER_0552  LysR family transcriptional regulator  26.03 
 
 
301 aa  69.3  0.00000000008  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.000594224  n/a   
 
 
-
 
NC_011830  Dhaf_1575  transcriptional regulator, LysR family  28.77 
 
 
295 aa  68.9  0.0000000001  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00000000000381269  n/a   
 
 
-
 
NC_010717  PXO_02614  transcriptional regulator LysR family  28.7 
 
 
296 aa  68.6  0.0000000001  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A2079  LysR family transcriptional regulator  29.73 
 
 
303 aa  68.9  0.0000000001  Burkholderia xenovorans LB400  Bacteria  normal  0.0843078  normal  0.804372 
 
 
-
 
NC_008532  STER_0486  LysR family transcriptional regulator  27.14 
 
 
298 aa  68.6  0.0000000001  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_3703  LysR family transcriptional regulator  25 
 
 
315 aa  68.6  0.0000000001  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_1535  DNA-binding transcriptional regulator CynR  28.86 
 
 
300 aa  68.6  0.0000000001  Serratia proteamaculans 568  Bacteria  normal  0.195582  normal 
 
 
-
 
NC_010320  Teth514_0044  LysR family transcriptional regulator  27.17 
 
 
297 aa  68.9  0.0000000001  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_4950  LysR family transcriptional regulator  35.45 
 
 
335 aa  68.9  0.0000000001  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_3921  transcriptional regulator, LysR family  26.77 
 
 
305 aa  67.8  0.0000000002  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_4725  transcriptional regulator, LysR family  31.9 
 
 
304 aa  68.2  0.0000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.255479  normal 
 
 
-
 
NC_012857  Rpic12D_4035  transcriptional regulator, LysR family  26.77 
 
 
305 aa  67.8  0.0000000002  Ralstonia pickettii 12D  Bacteria  normal  0.176512  normal 
 
 
-
 
NC_011892  Mnod_8569  transcriptional regulator, LysR family  37 
 
 
316 aa  67.8  0.0000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_5122  transcriptional regulator, LysR family  26.13 
 
 
298 aa  68.6  0.0000000002  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B0739  LysR-family transcriptional regulator  42.86 
 
 
308 aa  67.8  0.0000000002  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  hitchhiker  0.0000050568  n/a   
 
 
-
 
NC_007908  Rfer_1639  LysR family transcriptional regulator  31.75 
 
 
291 aa  67.8  0.0000000002  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_2178  transcriptional regulator, LysR family  29.73 
 
 
307 aa  68.2  0.0000000002  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C0812  LysR family transcriptional regulator  42.86 
 
 
308 aa  67.8  0.0000000002  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.0254349  normal  0.598657 
 
 
-
 
NC_011894  Mnod_3084  transcriptional regulator, LysR family  31.22 
 
 
296 aa  68.2  0.0000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_04720  Transcriptional regulator, LysR family  30.19 
 
 
299 aa  68.2  0.0000000002  Azotobacter vinelandii DJ  Bacteria  normal  0.245931  n/a   
 
 
-
 
NC_008392  Bamb_6272  LysR family transcriptional regulator  43.59 
 
 
316 aa  67.8  0.0000000002  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A0799  LysR family transcriptional regulator  42.86 
 
 
308 aa  67.8  0.0000000002  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  hitchhiker  0.00821953  normal 
 
 
-
 
NC_011080  SNSL254_A0751  LysR family transcriptional regulator  42.86 
 
 
308 aa  67.8  0.0000000002  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  hitchhiker  0.000639538  normal  0.380791 
 
 
-
 
NC_009438  Sputcn32_2000  putative DNA-binding transcriptional regulator  30.3 
 
 
329 aa  68.2  0.0000000002  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.0000154279  n/a   
 
 
-
 
NC_011094  SeSA_A0848  LysR-family transcriptional regulator  42.86 
 
 
308 aa  67.8  0.0000000002  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  hitchhiker  0.00362304  normal 
 
 
-
 
NC_010557  BamMC406_5976  LysR family transcriptional regulator  43.59 
 
 
316 aa  67.4  0.0000000003  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2142  LysR family transcriptional regulator  23.72 
 
 
296 aa  67.4  0.0000000003  Burkholderia xenovorans LB400  Bacteria  normal  0.90528  normal 
 
 
-
 
NC_010681  Bphyt_1589  transcriptional regulator, LysR family  31.15 
 
 
307 aa  67.4  0.0000000003  Burkholderia phytofirmans PsJN  Bacteria  normal  0.323043  normal 
 
 
-
 
NC_013093  Amir_4940  transcriptional regulator, LysR family  27.64 
 
 
310 aa  67.8  0.0000000003  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00000953992  n/a   
 
 
-
 
NC_014158  Tpau_3664  transcriptional regulator, LysR family  28.34 
 
 
297 aa  67.8  0.0000000003  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_4789  transcriptional regulator, LysR family  39.29 
 
 
308 aa  67.4  0.0000000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.537076  n/a   
 
 
-
 
NC_009485  BBta_7208  LysR family transcriptional regulator  27.76 
 
 
293 aa  67  0.0000000004  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.319627  normal 
 
 
-
 
NC_004578  PSPTO_2577  transcriptional regulator, LysR family  23.45 
 
 
297 aa  67  0.0000000004  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.216536  n/a   
 
 
-
 
NC_007948  Bpro_4525  LysR family transcriptional regulator  27.92 
 
 
300 aa  67  0.0000000004  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_3479  transcriptional regulator, LysR family  26.73 
 
 
297 aa  67  0.0000000004  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_1939  LysR family transcriptional regulator  25.87 
 
 
312 aa  67  0.0000000004  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.000010986  normal  0.809393 
 
 
-
 
NC_009720  Xaut_0855  LysR family transcriptional regulator  26.07 
 
 
308 aa  67  0.0000000004  Xanthobacter autotrophicus Py2  Bacteria  normal  0.931414  normal 
 
 
-
 
NC_008148  Rxyl_2065  LysR family transcriptional regulator  30.77 
 
 
320 aa  67  0.0000000004  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.102765  n/a   
 
 
-
 
NC_002976  SERP2157  LysR family transcriptional regulator  25.96 
 
 
293 aa  66.6  0.0000000005  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2268  regulatory protein, LysR:LysR, substrate-binding  23.84 
 
 
302 aa  66.6  0.0000000005  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.170931  normal  0.112201 
 
 
-
 
NC_010511  M446_1309  LysR family transcriptional regulator  41.11 
 
 
308 aa  66.6  0.0000000005  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.220752 
 
 
-
 
NC_009513  Lreu_0943  LysR family transcriptional regulator  27.32 
 
 
294 aa  66.6  0.0000000005  Lactobacillus reuteri DSM 20016  Bacteria  normal  0.10979  n/a   
 
 
-
 
NC_011080  SNSL254_A4616  LysR family regulatory protein  29.52 
 
 
295 aa  66.2  0.0000000006  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A4666  LysR family regulatory protein  29.52 
 
 
295 aa  66.2  0.0000000006  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.54567  normal 
 
 
-
 
NC_011083  SeHA_C2521  putative transcriptional regulator  24.55 
 
 
292 aa  66.2  0.0000000006  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.47835 
 
 
-
 
NC_010338  Caul_0449  LysR family transcriptional regulator  29.44 
 
 
317 aa  66.2  0.0000000006  Caulobacter sp. K31  Bacteria  normal  0.206792  normal 
 
 
-
 
NC_011083  SeHA_C4614  LysR family regulatory protein  29.52 
 
 
295 aa  66.2  0.0000000006  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.342206 
 
 
-
 
NC_011094  SeSA_A4523  LysR family regulatory protein  29.52 
 
 
295 aa  66.2  0.0000000006  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B4531  LysR family regulatory protein  29.52 
 
 
295 aa  66.2  0.0000000006  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_013203  Apar_0368  transcriptional regulator, LysR family  25.98 
 
 
304 aa  66.6  0.0000000006  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_0271  LysR family transcriptional regulator  28.91 
 
 
295 aa  66.2  0.0000000006  Enterobacter sp. 638  Bacteria  normal  0.0648353  normal 
 
 
-
 
CP001509  ECD_01898  DNA-binding transcriptional dual regulator of nitrogen assimilation  35.42 
 
 
305 aa  66.2  0.0000000007  Escherichia coli BL21(DE3)  Bacteria  decreased coverage  0.0024282  n/a   
 
 
-
 
CP001637  EcDH1_1667  transcriptional regulator, LysR family  35.42 
 
 
305 aa  66.2  0.0000000007  Escherichia coli DH1  Bacteria  hitchhiker  0.00000000420428  n/a   
 
 
-
 
NC_010468  EcolC_1657  nitrogen assimilation transcriptional regulator  35.42 
 
 
305 aa  66.2  0.0000000007  Escherichia coli ATCC 8739  Bacteria  hitchhiker  0.000208245  hitchhiker  0.00930832 
 
 
-
 
NC_010002  Daci_4014  LysR family transcriptional regulator  26.76 
 
 
316 aa  66.2  0.0000000007  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.993243 
 
 
-
 
NC_009800  EcHS_A2111  nitrogen assimilation transcriptional regulator  35.42 
 
 
305 aa  66.2  0.0000000007  Escherichia coli HS  Bacteria  hitchhiker  2.1125e-19  n/a   
 
 
-
 
NC_010498  EcSMS35_1136  nitrogen assimilation transcriptional regulator  35.42 
 
 
305 aa  66.2  0.0000000007  Escherichia coli SMS-3-5  Bacteria  hitchhiker  0.0000000190292  hitchhiker  0.000106963 
 
 
-
 
NC_009801  EcE24377A_2270  nitrogen assimilation transcriptional regulator  35.42 
 
 
305 aa  66.2  0.0000000007  Escherichia coli E24377A  Bacteria  hitchhiker  0.00000000041726  n/a   
 
 
-
 
NC_012892  B21_01887  hypothetical protein  35.42 
 
 
305 aa  66.2  0.0000000007  Escherichia coli BL21  Bacteria  decreased coverage  0.0017445  n/a   
 
 
-
 
NC_008751  Dvul_0075  LysR family transcriptional regulator  29.23 
 
 
296 aa  66.2  0.0000000007  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_004116  SAG1367  LysR family transcriptional regulator  27.04 
 
 
301 aa  65.9  0.0000000008  Streptococcus agalactiae 2603V/R  Bacteria  hitchhiker  0.000461256  n/a   
 
 
-
 
NC_011887  Mnod_8089  transcriptional regulator, LysR family  28.04 
 
 
309 aa  65.9  0.0000000008  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007336  Reut_C6126  LysR family transcriptional regulator  25.82 
 
 
302 aa  65.9  0.0000000008  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_2832  nitrogen assimilation transcriptional regulator  35.42 
 
 
305 aa  66.2  0.0000000008  Escherichia coli O157:H7 str. EC4115  Bacteria  unclonable  0.00000000572709  normal  0.465707 
 
 
-
 
NC_009654  Mmwyl1_0148  LysR family transcriptional regulator  32.31 
 
 
309 aa  65.9  0.0000000008  Marinomonas sp. MWYL1  Bacteria  normal  0.0716986  decreased coverage  0.0000000188935 
 
 
-
 
NC_010658  SbBS512_E0970  nitrogen assimilation transcriptional regulator  35.42 
 
 
307 aa  65.9  0.0000000008  Shigella boydii CDC 3083-94  Bacteria  hitchhiker  0.000000000243153  n/a   
 
 
-
 
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