| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_3479 |
|---|
| Symbol | |
|---|
| ID | 8599663 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | + |
|---|
| Start bp | 3683867 |
|---|
| End bp | 3684760 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_003310248 |
|---|
| Protein GI | 269122071 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATAC GGGTTCTTCG TTATTTTTTA GCTATAGCCA GAGAAGGAAG CATCACAAAT
GCTGCTAATT TTCTTCATGT AACACAGCCT ACGCTATCTC GTCAAATCAA AGACTTAGAA
GATGAGCTGG GAAAAAAACT GTTTGTCCGC GGCAGCCATA ATATGTCACT TACCAGAGAG
GGAATTATAT TTTACAAAAG AGCAGAGGAA ATCATATCTA TGGTGGATAA AACCGAAGCT
GAATTTAAAA CTATGGAAGA TTCAATTGCA GGAGACATTT ATATTGGCGG CGGAGAGACC
GAGGCTATAA AACTAATTGC AGAAGTTATC AGTGAATTAC GGGAAAACTA CCCAAACATA
CACTATCATC TTTACAGCGG CAATGCATTT GATGTAACAG AGCGAATTGA CTGCGGATTA
TTAGACTTCG GAATTCTTAT CCAGCCGGCA GATATTTCTA AATATGATTA TATTCATATT
CCGGCAAAAG ATACATGGGG TGTTGTTATG AGAAAGGACA GTCATTTAGC AGAAAAAAAA
TTTGTTACAA AATATGATTT ATTAAAATTG CCGTTGATAT GCTCCAGACA GGCTGTATCA
GACAGCAGCA CAGGAAATGA ATTTGCTGAT TGGTTTGGCA GAGATTTTAA AAAGCTGGAT
ATTGTAACTA CCTTCAATCT TATTTATAAC GCCGCTATTA TGGTAGAAGC CGGAATTGGA
TATGCTATCA CAATTGATAA AATTGCCAAC ACAACAGTAG GCAGCAACCT TTGTTTTCGC
CCGCTGGAAC CAAAATTAAA CTCCGATCTG GATATAATTT GGAAGAAACA TCAGGTATTT
TCTTCTGCGG CTGAACTATT TTTAAAAAGA ATTATGACAC ATTTTCAGAA ATAA
|
|---|
| Protein sequence | MEIRVLRYFL AIAREGSITN AANFLHVTQP TLSRQIKDLE DELGKKLFVR GSHNMSLTRE
GIIFYKRAEE IISMVDKTEA EFKTMEDSIA GDIYIGGGET EAIKLIAEVI SELRENYPNI
HYHLYSGNAF DVTERIDCGL LDFGILIQPA DISKYDYIHI PAKDTWGVVM RKDSHLAEKK
FVTKYDLLKL PLICSRQAVS DSSTGNEFAD WFGRDFKKLD IVTTFNLIYN AAIMVEAGIG
YAITIDKIAN TTVGSNLCFR PLEPKLNSDL DIIWKKHQVF SSAAELFLKR IMTHFQK
|
|---|
| |