| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2142 |
|---|
| Symbol | |
|---|
| ID | 4007362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | - |
|---|
| Start bp | 1006956 |
|---|
| End bp | 1007846 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637950564 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_553194 |
|---|
| Protein GI | 91777986 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 0.90528 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTTCC GGCTGCGTCA AATGGAGATA TTCCGCTCGG TCATGCTGAC CGGCTCGATC
AATGGCGCAG CCAAGCTGCT GTTCATTTCG CAGCCCGCCG TGAGCCGCAT CATTGCCCAT
ACCGAACAGA CGCTCGGCCT GAAGCTTTTC AATCGCGCGA AAGGCAAGCT GATTCCGACA
CCCGAAGGCG TCGCGCTATT CCGGCAGGTC GATGAGTTCT ACGAACACGC GCTACAGGTC
AACAATTTCG CGCGCGATCT GGCGCAAGGC GCGACCGGTA CGCTCAATCT CTCGTCCAGT
CCGTGTCTGA GCTATACGGT AATGCCGCGC GCCATTGCCC AGTTCATTGC GCGCTATCCG
AAGATCCGGG TGGTTTATCA CACGTCGCAA CTGAACTGCA TGGCGACCGA GGTACTCAGC
AACAAGGTCG ATGTCGCTGT CGCCGTGATG CCGATCCAGC ATCCGAACGT GAAAGTCGAG
GTGTTCACGA CCGGCAAGAT GGCCTGCGTG CTGCCCAAGG ATCATCCGCT CGGCAGTCAG
ACCGTGCTGT CGCTCGCCGA CGTCTCGGCG TATCCGCTGA TCGTGCATCA TCCGAGCATC
ACGTTCGGCA AACTCGTTTC GACCGCGTTT CGCGACGCGG GCCTCGAAAT GCGCTCGCGC
GTCAACGTGT TCCAGACCGA CGTGGCATGC TCGCTGGTGC GGGCCGGCGC GGGTATCGCC
ATCGTCGACG AATACACGGC GTGCGCGGGC GCATGGCACG ACCTGATGCA ACGTCCGCTT
GCCGAGCCGA TCACGCTGAC GCCGTGCATC GTGCGCTCCG CGTTTGACAA TCAGGCCACC
CACGCCGACA AGTTCATCGA GATCCTGCGC GGCGTCGCCC ACGCGCGCTG A
|
|---|
| Protein sequence | MDFRLRQMEI FRSVMLTGSI NGAAKLLFIS QPAVSRIIAH TEQTLGLKLF NRAKGKLIPT
PEGVALFRQV DEFYEHALQV NNFARDLAQG ATGTLNLSSS PCLSYTVMPR AIAQFIARYP
KIRVVYHTSQ LNCMATEVLS NKVDVAVAVM PIQHPNVKVE VFTTGKMACV LPKDHPLGSQ
TVLSLADVSA YPLIVHHPSI TFGKLVSTAF RDAGLEMRSR VNVFQTDVAC SLVRAGAGIA
IVDEYTACAG AWHDLMQRPL AEPITLTPCI VRSAFDNQAT HADKFIEILR GVAHAR
|
|---|
| |