Gene SeD_A0799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0799 
Symbol 
ID6874255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp792972 
End bp793898 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content56% 
IMG OID642783994 
ProductLysR family transcriptional regulator 
Protein accessionYP_002214673 
Protein GI198242900 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.00821953 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTTC GCCAGTTACG CTATTTCGTG CGTATTATTG AAACCGGCAG TATGGGCAGC 
GCCGCACAGG ATCTTGATAT TGGCGTTTCA GCATTAAGTC AACAGATGTC CCGTCTGGAA 
AACGAGCTTG CCATCCGTCT GCTGCAGCGC ACTTCGCGCG GCGTAACGCC AACCAACGCC 
GGGCTGGCCT TTTATTCGCA GGCGCAACTC GCCCTGCGTC ATGCCGACGA CGCAATTCTC 
GCCGCCAGAG AAGCGCGCCT TTCCGGTCAT GTGAGCGTAG GAACGGCCCC CAGTACCGCC 
TCCATACTGG GTATACCGTT TATCCATGCC ATGCAGGAAA ACTATGCCGA TGTTCGACTG 
CATGTGGTGG AAAGCTTGTC CGGTAATCTG GAAAGAATGA TCAATACCCG CCAGATTGAT 
TTAGCCGTTG TCTTTCAAAA AGATAAAATC CTGCGCTGGA GCGCCAGACC GATCCTTGAA 
GAACAGCTTT TTCTGATTGG CTCCCATGCC CTGCTGGCGG CGCTTCCTGA TAACCCGATC 
ACACCTGAAC AACTGGCAGG CATTCCGCTC ATTATGCCAA GCCAGGGACA TGGGCTGCGC 
GGCAGGCTGG ACGCTGTCTG CCAGGAACAT GCGCTTAACG TTGAGATCGT CGCGGAAATT 
GACGGTCTGG CGTTGTTGAT GCGCGCCGTG CGCGACGGTC TTGGCGCCAC GTTGCAGCCC 
GGCGCGGCGA TTTCTCATCT GGATAACGAC GCGCTACGCG TGATCGGCGT CCATAATCCG 
GTACTCAGCC GCCCCAATTT TTTAGTCAGC CTGTCGGATG ATGAACTGAC GCCCGCCGGC 
CTTGCCGCCA GAGTAGTCCT TACCAAAGTT ATGCGTCAGT TAGTCGACGC CGGTGAATGG 
CCAGGCGCAA CCCTTTACGC TTACTAA
 
Protein sequence
MELRQLRYFV RIIETGSMGS AAQDLDIGVS ALSQQMSRLE NELAIRLLQR TSRGVTPTNA 
GLAFYSQAQL ALRHADDAIL AAREARLSGH VSVGTAPSTA SILGIPFIHA MQENYADVRL 
HVVESLSGNL ERMINTRQID LAVVFQKDKI LRWSARPILE EQLFLIGSHA LLAALPDNPI 
TPEQLAGIPL IMPSQGHGLR GRLDAVCQEH ALNVEIVAEI DGLALLMRAV RDGLGATLQP 
GAAISHLDND ALRVIGVHNP VLSRPNFLVS LSDDELTPAG LAARVVLTKV MRQLVDAGEW 
PGATLYAY