| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2065 |
|---|
| Symbol | |
|---|
| ID | 4115777 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 2096209 |
|---|
| End bp | 2097171 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638036852 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_644822 |
|---|
| Protein GI | 108804885 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.102765 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTCTACA GGCAGCTGGA GTGCTTTCTC GCGGTGGCCC GTACGGGGAA TCTGAGCCGG
GCGGCGGAGG AGATGTACCT CACGCAGCCG ACGCTGACGG CGCGGCTCAA GGCCCTGGAG
GAGGAGCTGG GTGACCAGCT CTTCGTGAGG ACGAGCCGCG GGATGCGGCT GACGGAGGCG
GGGCGGGAGT TTCTGCCGTA TGCGGAGCGG GTGGTGAGCA GCTTCGAGGA GGGCAAGCGG
CGGCTGGAGG AGCTGAGGGG GGCTTCCGGG GGCAAGCTAG TCGTGGGGGC GTCGCCGGGG
GTGGGGACGT ACGCGCTGCC GGGGCTTCTG GAGCGGTTCG TGGGGGCGTA CCCGAAGGTC
AACGTCTCGG TGCGGACCGG CCACTCGGAG GACATCCTGG AGATGGTGCT GAGGGAGGAG
GTACACCTGG GGCTCACCAG GGAGATGCGG CACCCCGAGG TGGAGAGCGT ACCGCTCTAC
GAGGACGAGC TGGTGCTGGT GGTGGCGCCG GAGCACCGCT TCACGCAGAG GGGTTCTGCG
GGGCTGGCGG AGATAGGCGA GGAGCAGCTC ATCCTCTTCG ACAACGACTC GAGCTACTAC
GAGCAGACGC AGGCGCTGTT CACCAGCGCG GGCATCCGGG AGCTCAGGAC GCTGGAGGTG
GACAACATCG AGGCGGCCAA GCGGATGGTC GAGCACCGGC TCGGGATAGC CTTTCTCCCC
CGCTCGGCGA TAGTCCGGGC GGTTTCGGCG GGGAACCTGG TGCTCATCCG GGTGGAGGAC
GGCCCGGAGA TGACCCGCTC CATCGTGGCG CTGCGGCGGC GGGACGCACC GGCCAGCGGG
CCGGTGCGGG CGTTTCTGGA GCTGGCCTAC GGCATGGCGG AGAGGAAGGA GGAGCGGACC
AAGCTCTCGC CGGCGCTGGC GGCGGAGTTC GAGAACCTGC AACTCATAGA CCTGTTCACC
TAG
|
|---|
| Protein sequence | MLYRQLECFL AVARTGNLSR AAEEMYLTQP TLTARLKALE EELGDQLFVR TSRGMRLTEA
GREFLPYAER VVSSFEEGKR RLEELRGASG GKLVVGASPG VGTYALPGLL ERFVGAYPKV
NVSVRTGHSE DILEMVLREE VHLGLTREMR HPEVESVPLY EDELVLVVAP EHRFTQRGSA
GLAEIGEEQL ILFDNDSSYY EQTQALFTSA GIRELRTLEV DNIEAAKRMV EHRLGIAFLP
RSAIVRAVSA GNLVLIRVED GPEMTRSIVA LRRRDAPASG PVRAFLELAY GMAERKEERT
KLSPALAAEF ENLQLIDLFT
|
|---|
| |