| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_0552 |
|---|
| Symbol | |
|---|
| ID | 4437073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | + |
|---|
| Start bp | 497343 |
|---|
| End bp | 498248 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639676266 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_820023 |
|---|
| Protein GI | 116627404 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000594224 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACATAC AACAACTACG TTATGTCGTA GCCATTGCCA ACAGCGGAAC CTTTCGTGAG
GCGGCCAGCA AGCTCTTTGT GAGTCAGCCT AGTCTATCAG TGGCTATCAA GGATTTGGAG
CAGGAGTTAA ATTTTAAAAT TTTCACCCGT ACAACGACGG GGGCAGTCTT GACCAGTCAG
GGCATGACCT TTTATGAACG CGCGCTTGAG GTGGTTCGAA GTTTTGATAG TTTTGAAAAT
CGCTATCTTA ATGCTTCTGA GAAGGGCAAC CAGTTTTCGA TTTCCAGTCA GCACTATGAT
TTTTTGCCAC CTTTGATTAC AACTTTTTCG GAACGTTACC CTGATTACAA GGATTTACGT
ATCTTTGAGT CTACGACCGT TCAAATTTTG GATGAAGTAG CCAAGGGGCA AAGTGAGATT
GGAATTATCT ATTTGAATCG TCAAAATAGT AAGGGCATCC AACAAAATAT GGATAAGCTT
GGGCTTGAGT CTATTAATTT AATTCCATTT AAGACTCATA TTTATCTTCG TAAGGGCCAT
CCACTGGCTC ATAAAGAGAG TTTAGTAATG GAGGATTTGG CACACCTACC TACCGTACGT
TTTACTCAGG AGAAGGACGA GTACCTGTAC TATTCTGAAA ACTTTGTGGA TACATCAGAT
TCGTCTCTTA TGTTTAACGT GACAGATCGT GCGACTTTGA ATGGTATCTT GGAGCGTACG
GATGCTTATG CGACGGGTTC TGGTTTCCTT GATGCTCAAA GTGTAAACGG TATTACAGTT
ATTCCACTTG AGGATAATTT GGATAACAAG ATGGTTTATG TTCGCCGTAA AGGAATTAAC
TTGTCGTCGT GTGCTCTCAA GTTTGTCAAT GTTATGTTTG ACTACTTTGA TACTTATAAA
CCATAG
|
|---|
| Protein sequence | MNIQQLRYVV AIANSGTFRE AASKLFVSQP SLSVAIKDLE QELNFKIFTR TTTGAVLTSQ
GMTFYERALE VVRSFDSFEN RYLNASEKGN QFSISSQHYD FLPPLITTFS ERYPDYKDLR
IFESTTVQIL DEVAKGQSEI GIIYLNRQNS KGIQQNMDKL GLESINLIPF KTHIYLRKGH
PLAHKESLVM EDLAHLPTVR FTQEKDEYLY YSENFVDTSD SSLMFNVTDR ATLNGILERT
DAYATGSGFL DAQSVNGITV IPLEDNLDNK MVYVRRKGIN LSSCALKFVN VMFDYFDTYK
P
|
|---|
| |