| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0761 |
|---|
| Symbol | |
|---|
| ID | 7134943 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | - |
|---|
| Start bp | 690101 |
|---|
| End bp | 691051 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643529168 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_002425250 |
|---|
| Protein GI | 218667339 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.211674 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAATGCGT TACATAAAAC ACAACGCCTT GAAGGATTGT CCATGAAACA CCTGCGCTTG
TTTAACTACA TTGACACGAT TGTCAGGGAA GGCTCGGTCC GTCGCGCTGC CGAAAAGCTG
CATATCACGG CGTCGGCACT GGATCGCCGC GTTCAGGATC TGGAAGAAGA ACTGGGTACT
GGCATTTTCG AGCGGCACCC GCGCGGGATG CGTCTCTCGG CCGCAGGCGA AGTTTTTCTG
GGTTATATAC GCCGGCACCT TTCCGACATG CAGCGCCTAC GCTCAGAAAT TGATAGCCTC
AACGGACTTC GCCGCGGCCA TGTTGCCCTC GCCGTCAGCC CCGCATTGGC GGCCGATTTC
ATCCCGCGAA TTATTAATAC ATTCAGAGAG CAGTATCCTG GGGTTTCCTT CTCGGTGACC
GTAGCGAAAC ATAGCGATGC GATTCGTGCG TTGTTAGCAT TTGAAGCCGA TCTGGTGGTC
ATCGTGGCAC CGCCCAGACA CCCAGACGTC ATCGACCTTG CTATATCCGA GCAGCCTCTG
GTAGCGGCGA TGGATCGCGC GCACCCTCTT GCCAGCCAAG GTACACTTCG CTTGAGTGAT
TGCATCCAGT ATCCTTTGGT GTTGCCGGCA CCGGGGCTTA CCTCACGCGA AATGCTGGAG
TCCGTGCTCC ACGGTCGACG ATCAGAAACT CATATCGCCG CCGAGAGCAA CTCCTATGAG
GTCATGCGTG GCCTGCTGTA CGGCACGCAA AACATTGGCT TTGTCATTTC AACGGGGATA
CCCAAAAATC GCATCAACGA AAATATCGTC TATCGGCCAA TTTCTGCCGT GGACATACGC
CCCGTACCAT TAGTATGTGC GCAACTCAAA AACCGAGGGA TTTCGGTCTC TGCCGCCCGT
TTTTCCAATT ATCTAGCCGA GGAGCTAAAT AATATGAATA TCATGGAATA A
|
|---|
| Protein sequence | MNALHKTQRL EGLSMKHLRL FNYIDTIVRE GSVRRAAEKL HITASALDRR VQDLEEELGT
GIFERHPRGM RLSAAGEVFL GYIRRHLSDM QRLRSEIDSL NGLRRGHVAL AVSPALAADF
IPRIINTFRE QYPGVSFSVT VAKHSDAIRA LLAFEADLVV IVAPPRHPDV IDLAISEQPL
VAAMDRAHPL ASQGTLRLSD CIQYPLVLPA PGLTSREMLE SVLHGRRSET HIAAESNSYE
VMRGLLYGTQ NIGFVISTGI PKNRINENIV YRPISAVDIR PVPLVCAQLK NRGISVSAAR
FSNYLAEELN NMNIME
|
|---|
| |